Xanthomonas albilineans: XALC_2257
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Entry
XALC_2257 CDS
T01160
Symbol
RecQ
Name
(GenBank) putative dna helicase superfamily II protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xal
Xanthomonas albilineans
Pathway
xal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XALC_2257 (RecQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xal03019
]
XALC_2257 (RecQ)
03400 DNA repair and recombination proteins [BR:
xal03400
]
XALC_2257 (RecQ)
Enzymes [BR:
xal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XALC_2257 (RecQ)
Messenger RNA biogenesis [BR:
xal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XALC_2257 (RecQ)
DNA repair and recombination proteins [BR:
xal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XALC_2257 (RecQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
CBA16739
UniProt:
D2UEZ3
LinkDB
All DBs
Position
2688706..2690514
Genome browser
AA seq
602 aa
AA seq
DB search
MPSPAHALLSRVFGYDQFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQIPSLLREGTG
IVVSPLIALMQDQVEALHQVGVRAEYLNSTLDAERAQHVERALLAGELDLLYVAPERLLT
PRFLSLIERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQTPRIALTATADPPT
QREIAERLDLAQARHFVSSFDRPNIRYTVVQKDNARRQLLDFLRGHRGSAGIVYCLSRRK
VEETADFLVREGLNALPYHAGLPANVRAEHQRRFLREEGIVMCATIAFGMGIDKPDVRFV
AHTDLPKSLEGYYQETGRAGRDGDAAEAWLCYGLGDVVLLKQMIEQGEAGEDRKRVERRK
LDQLLGYCESLQCRRQVLLANFGETYPQPCGNCDNCLQPADAWDATVAVQKALSCVYRSG
QRFGVGHLIDILRGNASEKIKQFGHERLSTYGIGKDLDIRAWRGVFRQLVATGLLEVDSD
AYGGLRLTDASRQVLKGERQIMMRRELPSRSRDRGDRSGSPRTGLPVQPQDLGLFNALRD
LRAGLAKEQNVPAFVIFHDSTLRNIAEQRPTNLDALARVGGIGGSKLARYGQQLIEVVRA
QG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccccgcccacgctttgctcagccgcgttttcggctacgaccagttccgcggc
ccgcaacaggacatcgtcgaacatgtcgctgccgggcacgatgcactggtgctgatgccg
accggcggcggcaagtcactgtgttatcaaatcccctcgctgttgcgcgagggcaccggc
atcgtggtctcgccgctgatcgcgctgatgcaggaccaggtcgaggcgctgcatcaggtc
ggcgtgcgcgccgaatatctcaactccaccctggacgcggaacgcgcgcaacacgtcgag
cgcgccttgttggccggggaactggatttgctttacgtggcaccggaacggctactgaca
ccgcgcttcctgtcgttgatcgaacgcagccgcatcgctctgttcgccatcgacgaagca
cactgcgtgtcgcagtggggccacgatttccgcccggagtaccgccagctcaccgtgctg
cacgagcgctggccgcagaccccgcgcatcgccctgaccgccaccgccgatccgccgacc
cagcgcgagatcgccgaacgcctggacctggcccaggcccgccacttcgtcagctccttc
gaccgccccaacatccgctacaccgtggtgcagaaggacaatgcccgccggcaattgctg
gacttcctgcgcggacaccgcggcagtgccggcatcgtctactgcctgtcgcgacgcaag
gtcgaggaaactgcggatttcctggtccgggaaggactcaatgcactgccctatcacgcc
ggactgcctgccaacgtccgcgccgaacaccagcgccgcttcctgcgcgaggaaggcatc
gtgatgtgcgccaccatcgccttcggcatgggcatcgacaaacccgacgtgcgcttcgtc
gcccacaccgacctgcccaaatcgctggaaggctactaccaggaaaccggccgcgccggc
cgcgacggcgacgccgccgaagcctggctgtgctatggcctgggcgacgtggtgctgctc
aagcaaatgatcgaacagggcgaagccggcgaggatcgcaaacgcgtggagcgacgcaag
ctcgaccaactgcttggctactgcgaatcgctgcagtgccgccgccaggtgctactggcc
aacttcggcgagacctacccacagccctgcggcaattgcgacaactgcctgcaaccggcc
gatgcctgggatgccaccgtggccgtgcagaaggcgctcagttgcgtctaccgcagcggc
cagcgcttcggcgtgggccacttgatcgacatcctgcgcggcaacgcaagcgaaaagatc
aagcaattcggtcacgaacgcctcagtacctatgggatcggcaaggatctggacatacgc
gcctggcgtggcgtgttccgtcaactggtcgccaccggcctgctggaagtggacagcgac
gcttacggcggcttacgcctcaccgacgccagccgccaagtgctcaaaggcgaacgccag
atcatgatgcgccgcgaactgcccagtcgcagccgcgaccgcggcgaccgcagcggcagc
ccgcgcaccggcctgccggtgcagccacaggatctgggcttgttcaacgcgctacgcgat
ctgcgtgccggcctggccaaagaacaaaacgtgcccgccttcgtcatcttccacgacagc
accctgcgcaacatcgccgaacaacgccccaccaacctggatgcactggcacgtgtcggc
ggaatcggtggcagcaagctggcccgctacggccagcaattgatcgaggtggtacgtgcg
cagggctga
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