Xanthomonas albilineans: XALC_2478
Help
Entry
XALC_2478 CDS
T01160
Symbol
holA
Name
(GenBank) probable dna polymerase III delta subunit protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xal
Xanthomonas albilineans
Pathway
xal03030
DNA replication
xal03430
Mismatch repair
xal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XALC_2478 (holA)
03430 Mismatch repair
XALC_2478 (holA)
03440 Homologous recombination
XALC_2478 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xal03032
]
XALC_2478 (holA)
03400 DNA repair and recombination proteins [BR:
xal03400
]
XALC_2478 (holA)
Enzymes [BR:
xal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XALC_2478 (holA)
DNA replication proteins [BR:
xal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XALC_2478 (holA)
DNA repair and recombination proteins [BR:
xal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XALC_2478 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
CBA16957
UniProt:
D2U9K5
LinkDB
All DBs
Position
complement(2945483..2946517)
Genome browser
AA seq
344 aa
AA seq
DB search
MELRPEQLLTQPAAQPLHPVYLIAGPETLRVLEAADAVRARARAAGIGEREVFDADGRDF
DWDQLYSSFNSPSLFSPRRLIELRLPSGKPGKEGSEVIAAFCADPPPDVVLLITCNEWSK
AHQGKWADAVGRIGVIAVAWAIKPHELGDWIERRLRGKGLRADAGAVQRLAERVEGNLLA
AAQEIDKLALLSDGQGLDVAAMESLVADAARYDVFRLAEATLGGQAPAVRRMLAGLRAEG
EAVAALLPILIKELLRTAVLAKVQAAGGNLAAEMKAQGIWEARQAPFKRALQRHCAPRRW
ERFAAEAGRIDRIAKGRADGDAWIALERLLLAVAEARAVRLLVV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgtcccgaacaactgctcacccagcctgccgcgcagccgctgcacccggtc
tatttgatcgccggtccggaaaccttgcgggtgttggaggcggccgatgcggtgcgcgcc
cgtgcgcgcgccgccggcatcggcgagcgcgaggtgttcgatgccgatggacgcgacttc
gactgggaccaactctattccagcttcaattcccccagcctgttcagcccgcgacggctg
atcgagttgcgcttgcccagcggcaagcccggcaaggaggggagcgaggtgatcgccgcg
ttctgcgccgatccgccgccggacgtggtgttgctgatcacctgcaatgagtggagcaag
gcgcaccaaggcaaatgggccgatgcggttgggcgcatcggcgtgattgcggtggcttgg
gcgatcaagccgcacgaattgggcgattggatcgagcggcgcctgcgcggcaagggcctg
cgtgccgatgccggcgcagtgcagcggctggccgagcgggtcgagggcaatctgctggcg
gcggcgcaggaaatcgacaagctcgctttgctgagcgacggacaggggctggacgtggcg
gcgatggagtcgctggtcgccgatgcggcgcgctacgacgtgttccggctggccgaggcc
accttgggcgggcaggcgccggcggtgcggcgcatgctcgccggtctgcgcgccgaaggc
gaggcggtggcggcgttgttgccgatcctgatcaaggaactgctgcgcacggcggtactg
gccaaggtgcaggcggccggtggcaatctggccgcggagatgaaggcgcagggtatttgg
gaagcgcggcaggcgccgttcaagcgtgctttgcaacgccattgcgcgccgcgccgctgg
gagcgcttcgccgccgaggccggacgtatcgatcgcatcgccaaggggcgtgccgacggc
gatgcctggatcgcgctggaacgcctgttgctggctgtcgccgaggcgcgtgcggtgcgg
ttgttggtggtatga
DBGET
integrated database retrieval system
