Xanthomonas albilineans: XALC_2875
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Entry
XALC_2875 CDS
T01160
Symbol
rpoH
Name
(GenBank) probable rna polymerase sigma-32 factor protein
KO
K03089
RNA polymerase sigma-32 factor
Organism
xal
Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xal03021
]
XALC_2875 (rpoH)
Transcription machinery [BR:
xal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XALC_2875 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_11
HTH_3
HTH_AsnC-type
HTH_10
KORA
GntR
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
CBA17352
UniProt:
D2UG41
LinkDB
All DBs
Position
complement(3403112..3403990)
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AA seq
292 aa
AA seq
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MSQTLPTTALVANNLPIPSPLGSLDAYIGAVHQIPVLTSEEEHALAVRYRDQEDLDAARE
LVHSHLRFVVHVARGYNGYGLPLGDLVQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAE
MHEYILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVTAVAKDLNVSEREVLEME
SRLSGRDIGFDAPSDEDDDHAPPSPAAYLMANEEDPSQAYERADSDDNQLQLLREGLAEL
DARSRDIIERRWLDADSKITLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagccagactcttcctaccaccgcattggtggccaacaatcttccgattcccagtccg
ctcggttcgctggatgcctatatcggcgccgtgcaccagatcccggtgctgacgtccgag
gaggagcacgccttggcggtgcgctaccgcgaccaggaggacctggatgcggcccgcgaa
ctggtccattcccacttgcgcttcgtggtccatgtagcccgcggctacaacggctatggt
ctgccgctgggcgatcttgttcaggagggcaacatcggcctgatgaaggcggtcaagcgc
ttcgacccggacatgggcgtgcgtttggtcagcttcgcggtgcactggatccgtgccgag
atgcacgagtacattctgaagaactggcgtatcgtcaaggtcgctacgaccaaggcgcag
cgcaagctgttcttcaacctgcgcaagtccaagacccgcctgggctggatgaacgcggca
gaagtgacggcggtcgccaaggacctcaacgtgtccgagcgcgaggtgctggagatggaa
tcgcgtctgtcaggtcgcgacatcggcttcgacgccccgtccgacgaggacgacgatcat
gcgccgccctcgccggctgcctatctgatggccaacgaggaagatccttcgcaggcctac
gaacgtgccgacagcgatgacaatcaactgcaactgttgcgcgaaggcttggcggaattg
gatgcgcgctcgcgcgacatcatcgagcgtcgctggttggacgcggacagtaagatcacg
ctacaggaactagccgacgagtatggcgtttcggccgaacgcatccgccagatcgaggcc
aacgcgctgaagaagatgaaggcgctgttcgtcgcctga
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