Xanthomonas sp. ISO98C4: AC801_12285
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Entry
AC801_12285 CDS
T06033
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xan
Xanthomonas sp. ISO98C4
Brite
KEGG Orthology (KO) [BR:
xan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xan03009
]
AC801_12285
Enzymes [BR:
xan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AC801_12285
Ribosome biogenesis [BR:
xan03009
]
Prokaryotic type
rRNA helicases
AC801_12285
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZU30604
UniProt:
A0A3Q9Q2T1
LinkDB
All DBs
Position
2867429..2868805
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AA seq
458 aa
AA seq
DB search
MNEFSALPLSPALAPGIDALGYTVLTPIQAQSLPPILQGLDVIAQAPTGSGKTAAFGLGL
LQKLDPAVTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
LLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQ
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
AIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattctccgcgctgccgctgtcgccggccctggcccccggcatcgacgccctt
ggctacaccgttttgacccccatccaggcgcagagcctgccgccgatcctgcaggggctc
gatgtcatcgcgcaggcgcccaccggcagcggcaagaccgccgcgttcggactgggcctg
ctgcaaaagctcgacccggcagtgacccgcgcacaggcgctggtgctgtgccccacccgc
gagctagccgaccaggtcggcaagcagctgcgcaagctcgccaccggcatccccaacatg
aagctggtggtgctcaccggcgggatgccgctgggcccgcagctggcctcgctggaggcg
cacgacccgcaagtggtggtcggcacgcccggtcgcatccaggaactggcccgcaaacgc
gccctgcacctgggcggcgtgcgtacgctggtgttggacgaggccgaccgcatgctcgac
atgggcttcgaagaacccatccgcgagatcgccagccgctgcgataaacatcgccagagc
ctgctgttttcggccacgttcccggacagtattcgcacgctcgcacgcgagctgttgaaa
gagccggtcgagatcaccgtggaaggcgccgatagcgcaccggagatcgatcagcagttc
ttcgaggtcgacccgacctatcggcaaaaggccgtcgccggcctgctgctgcgcttcaat
cccgaatccagcgtggtgttctgcaatacccgcaaggaagtggacgaggtggctggctcg
ctgcaggaattcggtttttctgcgcttgccttgcatggcgacatggagcagcgcgaccgc
gatgaagtgctggtgcgcttcgtcaaccgcagctgcaacgtgctggtggccagcgacgtg
gccgcacgcgggctggacgtggaagacctctcggccgtggtcaattacgagctgcccacc
gataccgaaacctatcgccaccgcattggccgtactgcgcgcgccggcaagcacgggttg
gcactgagcctggttgccccgcgcgaaactgcccgcgcgcaggcattggaaaccgaacaa
ggccagccgttgaaatggtcgcgtgcaccgctggccacggcgcgcccggcgcaactgccg
caggcggcgatgaccaccttgcgcatcgatggcggcaagaccgacaagctgcgtgccggc
gacatcctgggcgcgttgactggcgaagccgggctctcgggcgcggcaatcggcaagatc
gccatctacccgacccgctcctacgtggccattgcccgcgcgcaggtcgccaaggcgctg
gcacatctgcacgcaggcaagatcaagggacgccggtttcgggtcagcaagctctga
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