Xanthomonas sp. ISO98C4: AC801_14035
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Entry
AC801_14035 CDS
T06033
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xan
Xanthomonas sp. ISO98C4
Pathway
xan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AC801_14035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xan03019
]
AC801_14035
03009 Ribosome biogenesis [BR:
xan03009
]
AC801_14035
Enzymes [BR:
xan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AC801_14035
Messenger RNA biogenesis [BR:
xan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AC801_14035
Ribosome biogenesis [BR:
xan03009
]
Prokaryotic type
rRNA helicases
AC801_14035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
adh_short
P-loop_SecA
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AZU30938
LinkDB
All DBs
Position
complement(3270380..3272278)
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AA seq
632 aa
AA seq
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MTQESSAPLLFADLGLSDAVMKAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKT
AAFALPVLSNADLNQVKPQALVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQ
QLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKL
PEQRQVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIRQRYWWVSGLHKLDALT
RILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQAAREKTIAQLKDGKLD
ILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRNGDAILFVTPREKGML
RSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAGGQIDMYRDLLQRYEAENNVP
AIDIAAALAKLLQGDAPFLLTPPVRGAREESAPRQRNERADRGERPRFEPTFERGPRADS
DRAPRPPRGDNAGERPRREPAPRGEPEFGMESYRIEVGHSHGVKPANIVGAIANEAGLES
RYIGRIDIQDDYSILDLPADMPRELLAHLKKVWVSGQQLNMRKLEDGEAAGAASKPRFPR
GGKPSGRPNGPGRPMDRAGAPHRKGPPKPRGE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagaatcttccgcgccgctgctgtttgcagatctcggcctctcggacgctgtg
atgaaggccgttgccaatgttggctacgagtcgccgtcgccgatccaggctgccaccatc
cccgcgttgctggccggtcgcgatgtgctcggccaggcccagaccggcaccggcaagacc
gccgcgttcgcgctgccggtgctgtccaacgccgatctcaaccaggtcaagccgcaggca
ttggtgctggccccgacccgcgagctggccatccaggttgccgaggcgttccagaaatat
gccgaggccattcccggcttccgtgtgctgccggtctacggcggccagccgtatgcccag
cagctgagcgcgctcaagcgcggcgtgcacgtggtcgtcggtaccccgggccgggtgatc
gatcacctcgaccgcggcaccctggatctgtcgcagctcaagacgctggtgctggacgaa
gccgacgaaatgctgcgcatgggcttcatcgacgatgtcgaagcggtgctgaagaagctg
ccggagcagcgccaggtggccttgttctcggccaccatgccgccggccatccgccgtatc
gcgcagacctacctaaaagacccggccgaagtcaccatcgcggccaagaccaccacctcg
gccaatatccgccagcgctactggtgggtgagcgggctgcacaagctggatgcgttgacc
cgcattctcgaggtcgagccgttcgacggcatgatcatcttcgcgcgcaccaaggcggcc
accgaagaactggcgcagaagctgcaggcgcgtggcatggcggctgcggccatcaacggc
gacatgcagcaggccgcacgcgagaagaccatcgcccagctcaaggacggcaagctggat
atcctggtcgccaccgacgtggccgcacgcggtctggacgtggagcgcatcagccacgtg
ctgaactacgacattccttacgacaccgaaagctacgtgcaccgcatcggtcgcaccggt
cgtgccgggcgtaacggcgacgcgatcctgttcgtgacgccgcgcgagaagggcatgctg
cgttcgatcgaacgcgccacccgccagccgatcgaggaaatgcagctgccgagcgtggac
gcggtcaacgacacccgcgtcgcgcgtttcatgacccgcatcaccgagaccctggccggt
ggccagatcgacatgtaccgcgatctgctgcagcgctacgaggccgaaaacaacgtgccg
gcgatcgatatcgccgccgcgctggccaagctgctgcagggcgatgccccgttcctgctg
accccgccggtgcgcggtgcgcgcgaggaatccgctccgcgccagcgcaacgagcgtgcc
gaccggggcgagcgcccgcgtttcgaacccacgttcgaacgtggcccgcgcgccgacagc
gaccgcgctccgcgcccgccccgcggtgacaatgccggcgagcgtccgcgccgcgagccg
gccccacgtggggagccggagttcggcatggagagctatcgcatcgaagtaggccacagc
catggcgtgaagccggccaacatcgtcggcgcgatcgccaacgaagccggtctggaaagt
cgttatatcggtcgtatcgacatccaggatgattactcgatcctggatctgccggccgac
atgccgcgcgaattgctcgcccacctgaagaaggtctgggtgtccggtcagcagctgaac
atgcgcaagctggaagacggcgaagcggccggtgcggcgtccaagccgcgcttcccgcgt
ggcggcaagccgtccgggcgcccgaacggcccgggccgtccgatggaccgcgccggcgcg
ccgcaccgcaagggtccgccgaagccgcgcggcgagtaa
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