Xanthomonas sp. ISO98C4: AC801_19475
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Entry
AC801_19475 CDS
T06033
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xan
Xanthomonas sp. ISO98C4
Pathway
xan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AC801_19475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xan03400
]
AC801_19475
Enzymes [BR:
xan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AC801_19475
DNA repair and recombination proteins [BR:
xan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AC801_19475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AZU31975
LinkDB
All DBs
Position
complement(4542769..4543569)
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AA seq
266 aa
AA seq
DB search
MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA
STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGNLSVVSFYIPSGSSGELRQ
DYKFQVMQWLRPILEQWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLN
GLCADAPEDADPADGRGWVDSYRVLHPRGQDYTWWSNRGAARANNVGWRIDYQLVTPGLR
DTLKACSIYRDERFSDHAPYIVDYAQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatcagtttcaacgccaacggcctgcgctcggccgccagcaagggtttcttc
gcgtggttcgccgcccaggacgccgatgtgctgtgcgtgcaggagaccaaggcccaggag
caccaactggccgggccggatttcctgcccaccggctacaaagcctggtttcgcgacgcc
agcaccaagaagggctacagcggggtggcgatctacagccggcacgagcccgacgaggtg
cgcactgcgctgggctggccggagttcgacgaagaggggcgttatatcgaagcgcgcttc
ggcaacctcagcgtggtctccttctatattccctccgggtcctcgggcgagttgcgtcag
gattacaagttccaggtgatgcaatggctgcggccgatcctggagcagtggctggccagt
ggccgccagtacgtgctgtgcggcgactggaacatcgtgcgcaccgcattggacatcaag
aactggaaatccaaccagaagaactccggctgcctgccgcccgagcgcgattggctcaac
ggcctgtgcgccgacgcgccggaagacgccgaccccgccgacggccgtggttgggtcgac
agttaccgcgtgctgcatccgcgaggccaggactacacctggtggagcaatcgtggcgcg
gcgcgcgccaacaatgtcggttggcgcatcgactaccagctggtcacccccggcctgcgc
gacaccttgaaggcttgctcgatctaccgcgacgagcgcttctccgaccacgcaccgtac
atcgtggattacgcacagtga
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