Xanthomonas axonopodis Xac29-1: XAC29_00180
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Entry
XAC29_00180 CDS
T02500
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xao
Xanthomonas axonopodis Xac29-1
Brite
KEGG Orthology (KO) [BR:
xao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xao03032
]
XAC29_00180
03400 DNA repair and recombination proteins [BR:
xao03400
]
XAC29_00180
Enzymes [BR:
xao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XAC29_00180
DNA replication proteins [BR:
xao03032
]
Prokaryotic type
DNA Topoisomerases
XAC29_00180
DNA repair and recombination proteins [BR:
xao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XAC29_00180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AGH75572
LinkDB
All DBs
Position
44407..45561
Genome browser
AA seq
384 aa
AA seq
DB search
MAASTAGKLAAVATGAAVATAAVASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSF
SYRDADGQRIADAETLQRIRSLAIPPAYTEVWICAKPNGHLQATGRDARRRKQYRYHADW
ALVRGEGKFERVIAFGTALPKLRRRLRRDLLLPGFPREKVLAIVVALLADTLVRVGNAEY
ARSNRSYGLTTLRNRHMEFLKGGRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQS
LFQYRDDDGQLQPVDSGEVNDYLREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSE
RALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGQLQAMATGVRGERQWEAAT
LRFLSASRSKLKAQAKPASKRKSA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtggccgccagtaccgccggcaagctcgcggcggtcgccaccggcgcggctgtcgccaca
gccgccgtggcaagcgcggcagcggtggcgcaggccaaggcgaccgcgcgagcggccggg
ctgacctatgtcaacgatcaacagcccggcatcagccgccgcaaggccggcaagagcttc
agttaccgcgatgccgacgggcaacgcattgccgatgccgagaccttgcagcgcatccgt
tcgctggcgattccgccggcctataccgaagtgtggatctgcgccaagcccaatggccat
ctgcaggccaccgggcgcgatgcgcggcggcgcaagcaataccgctatcacgccgattgg
gcgctcgtgcgtggcgaaggcaagttcgaacgcgtgatcgccttcggcaccgcgctgccc
aaactgcggcggcggttgcgtcgcgatctgctgctgccgggatttccacgcgaaaaggtg
ttggcgatcgtggtggcgttgctggccgacaccctggtgcgcgtcggcaatgccgaatac
gcgcgcagcaatcgttcgtacggactgaccacactgcgcaaccggcacatggaatttctg
aaaggcggacgcgcgcggctgaagttccgcggcaagagcggccaggaccacgatatcgaa
gtggacgacaagcagctggtcaaactgatccggcaatgccagcagctgccggggcaatcg
ctgttccagtaccgcgacgacgatggccagttgcagccggtggattcgggtgaggtcaac
gactatctacgcgaggcgatgggcgaagacttcaccgccaaggatttccgcacctggggc
ggcaccttggctgcattgcagcggctggcacgcctgccattgcccgagcgtagcagcgaa
cgcgcgttgacgcaggtgcagaacgatgtcatccgtgaggtagccgatgccttgggcaac
acgccctcggtgtgtcgcaaggcctacatcgacccatgcgtcttcgaaggctggcgtgcg
ggccagctgcaggccatggccaccggtgtgcgtggcgagcgccagtgggaagcggccacg
ctgaggttcttgagcgcttcgcgtagcaagctcaaggcacaggcaaagccggcgtcgaag
cggaagtccgcatag
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