Xanthomonas axonopodis Xac29-1: XAC29_08680
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Entry
XAC29_08680 CDS
T02500
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xao
Xanthomonas axonopodis Xac29-1
Brite
KEGG Orthology (KO) [BR:
xao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xao03016
]
XAC29_08680 (truD)
Enzymes [BR:
xao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
XAC29_08680 (truD)
Transfer RNA biogenesis [BR:
xao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XAC29_08680 (truD)
Prokaryotic type
XAC29_08680 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGH77220
LinkDB
All DBs
Position
1985197..1986306
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AA seq
369 aa
AA seq
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MSETSLLPRAHGAAVLSAAMRSTPDDFQVDELPAFEPSGEGEHLLLTVRKRGQNTAYIAK
KLAHWAGIAEMGVSYAGLKDRHAVTTQRFSVHLPRRIAPDIAALDDTQMQVVESSWHNRK
LQRGALHGNRFVLTLRQVQGERDAIEQRLQAIAARGIPNWFGEQRFGRDGGNVAAALAMF
GHVQADDGTLLPAPTSRRRLRHDQRSMLLSAARSALFNRVLGARVAQGSWDGALEGEAWM
LDGSRSVFGPEPWSEALAERLARFDIHPSGPLWGAGQLRSTDQAAAVEQGALSDPPSIAL
RQGLEAAGLKQERRALRLRPHGLEYQWLEPQTLQLAFALPPGCYATAVLWELGDVADAGR
FNVDVRADA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacctctttgctgccgcgtgcgcatggcgccgcggtgctcagcgcggcgatg
cgcagcaccccggacgattttcaggtcgacgagctgccggcattcgaaccctccggcgaa
ggcgagcatctgctgctcaccgtgcgcaagcgtggccagaacacggcctatatcgccaaa
aagctcgcgcactgggccggcatcgccgagatgggcgtcagctatgcgggtctgaaagat
cgccatgcagtgaccacccagcgcttcagcgtgcatctgcccaggcgcatcgcgccggat
atcgccgcgctggatgatacgcagatgcaggtggtcgagagcagttggcacaatcgcaag
ctgcagcgcggtgcgctgcatgggaaccgcttcgtgctgacgctgcgccaggtgcagggc
gagcgcgatgcgatcgagcagcggctgcaggcgattgctgcgcgtggcatccccaattgg
ttcggcgaacaacgtttcggtcgcgatggcggaaatgtggcggctgcgctggcgatgttc
ggtcatgtgcaagctgacgacggaaccttgctgccggcgcccacatccaggcggcggcta
cgccacgatcagcgctcgatgttgctgtcggcagcgcgctcggccttgttcaatcgcgtg
ctcggcgcacgcgtggcgcaggggagttgggatggcgcactggagggcgaggcgtggatg
ctggacggctcgcgcagcgtcttcggcccggagccgtggagcgaggccttggccgagcga
ctggcgcgtttcgatatccatcccagtggcccgttgtggggcgctggccagttgcgctcg
accgaccaagcggcagcggtggagcagggcgcattgtccgacccgccatccatcgcattg
cgccaaggcctggaagctgcgggattgaagcaggaacgccgcgccctgcgcttgcgtccg
cacggtctggagtatcaatggctggagccgcagaccctgcagctcgccttcgcgctgccg
cccggttgctatgccaccgcagtgctgtgggaattgggagatgtcgccgacgccggtcgc
ttcaacgtcgacgtacgcgccgatgcgtga
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