Xanthomonas axonopodis Xac29-1: XAC29_12030
Help
Entry
XAC29_12030 CDS
T02500
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xao
Xanthomonas axonopodis Xac29-1
Pathway
xao00040
Pentose and glucuronate interconversions
xao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XAC29_12030
Enzymes [BR:
xao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
XAC29_12030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
AGH77863
LinkDB
All DBs
Position
2783838..2785508
Genome browser
AA seq
556 aa
AA seq
DB search
MPYHRLVPAVAPLPLALLGLSTFHASAALPHGQDAPDTAHSISTSWGEIQQPALPTKVCA
TLKAALTPVGGSVDMLDQNPAHSKRDTARLQAAIDDCPAGSAVRLAPGDAGESGVLSGPL
TIKSGVTLWIDRGVTLFGSRNPQDYDNGLGTCGTATSDKAKSCRPLIHLSDTANSAIVGA
GKIDGRGGSTLTAGPNAGKASWWDLAYLNVTKGLSQHVPRLLQIDDSADVTLYDITLENS
PNFHVISDNVVGLTAWGIKILAPSLVYSRPGYRCPAGSTPDVNPHATCFTPETAKNTDGF
DPGQSKNVLLAYSYIGTGDDGVAIKAHANSKRSIASENMLFAYNQFYYTHGFSLGSETDS
GMRHIAVRGLSIDGFNANDVQRDPYSANGLRIKSDASRGGQVYDISFENICMRGVARPLV
FDANYANPATRAAPPQFNGISLSHVHSLGSTTLGGGELSFYGYRDAGTTRPITISLDNVV
LEGGKVSFAQPHFGGPASNPGATHFTFKGGPVSFYDQLTESVPNDVQLQGKPGPGTPLQC
NDAFIAYHSVLPDSPI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccgtaccatcgccttgttcccgccgtcgcgccactgccccttgccctgctcggcctg
tccacgtttcacgccagcgcggcgctaccgcacgggcaggatgcacccgataccgcgcac
agcatttccaccagctggggggagatccagcagccagcattgccgaccaaggtatgcgcc
acgctcaaggctgcgctgaccccggtgggtggttcagtggatatgctcgaccagaaccct
gcccactccaagcgcgataccgcgcgcctgcaggcggccatcgacgattgccctgccggc
agcgcggtgcgtcttgcccccggcgatgccggcgaatccggcgtgctcagtgggccgctg
accatcaagagcggggtcacgctatggatcgaccgcggcgtcaccttgttcggctcgcgc
aatccgcaggactacgacaacggcctgggcacctgcggcaccgccaccagcgacaaagcc
aagtcgtgtcgtccgctgatccatctctccgacacggccaacagcgccatcgtcggcgcc
ggcaagatcgacggccgtggcggcagcacgctcactgccgggcccaatgccggcaaggcc
agctggtgggatcttgcctatctcaacgtcaccaagggcttgagccagcacgtgccgcgc
ctgttgcagatcgacgacagcgccgacgtcaccttgtacgacatcaccctggagaactcg
cccaatttccatgtcatcagcgacaacgtggtgggcctgaccgcgtggggcatcaagatt
ctggcgcccagcctggtctattcgcgtcccggctaccgatgcccggcaggcagcaccccg
gacgtcaatccgcacgcgacctgcttcacgccggagactgccaagaacaccgacggcttc
gacccgggccagtcgaagaatgtgctgctggcttactcgtacatcggcaccggcgatgac
ggtgtggcgatcaaggcgcacgccaacagcaagcgcagtatcgcctcggaaaacatgctg
ttcgcctacaaccagttctactacacccatggcttttcgctgggcagcgaaaccgattcg
ggcatgcgccatatcgccgtgcgcggcttgagcattgacggcttcaacgccaacgatgtg
cagcgcgatccctactcggccaatggcctccgcatcaagtccgacgcctcccgcggcggc
caggtctacgacatcagcttcgagaacatctgcatgcgcggggttgcgcggccactggtg
ttcgatgccaactacgccaatcccgccacccgcgccgcgccgccgcagttcaacggcatt
tcgctcagtcacgtgcattcgctgggttcgaccaccctgggtggcggcgaactgagtttc
tatgggtatcgcgatgccggcaccacccggccaatcaccatctcgctggacaatgtcgtg
ctggaaggcggcaaggtgagcttcgcgcagccgcatttcggcgggcccgcgagcaacccg
ggcgcgacgcacttcaccttcaagggtggcccggtgagcttttacgatcagctgaccgaa
tcggtgcccaacgatgtgcagctacagggcaaacccggcccgggcacgccactgcaatgc
aatgacgccttcattgcctatcactcggtactgccggattcgccgatttga
DBGET
integrated database retrieval system
