Xanthomonas axonopodis Xac29-1: XAC29_17850
Help
Entry
XAC29_17850 CDS
T02500
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xao
Xanthomonas axonopodis Xac29-1
Brite
KEGG Orthology (KO) [BR:
xao00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XAC29_17850
Enzymes [BR:
xao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
XAC29_17850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
Motif
Other DBs
NCBI-ProteinID:
AGH78979
LinkDB
All DBs
Position
4151944..4153629
Genome browser
AA seq
561 aa
AA seq
DB search
MRTVSVFSTRLASRARIATMPCFRTLTRVPRNRPHTFACALLLYAGVSAPALADFGISRS
GDRVIVDSGAELVFAVDARNGDIVSMRYRDNELQTTESKGSHIASGLGSASVDARIVGGT
IVVSAKAGDLVQYYIARKGRNAIYMATDAPSLMPVGELRFVARLNVSTLPNAQQEPDSNV
GKAIEGNDVFLLPDGRTSSKFYSARRMMDDQVHGVSGSGVAVFMLTGNRERSAGGPFFKD
IATQKTSVTHELYHYMYSDHTQTEAFRGGLHGVYGLLFTDGSSPSSAQLDTAFVDATLGL
SGYLPASGRGTVSGHVGGVLPGQPAVIGLRNAQAQYWATADGSGDYRVTGVRPGSYRMTL
YQNELDVAQRNIEVSAGATAHAALQAVVLPGTVKWQIGIPDGTPAGFRYADLLPRAHPSD
ARMHWSAVTYTVGSSSLSSFPAVQWRGINTPSRIDFTLPANEVRGYRLRIFVPLAQGSAR
PQISVNARWNGSVPAAPTQPKTRGITRGTARGNNTLYEVDIPASALHAGNNRIEIGIASG
SPDNGYLSPAIVFDSIQLVAL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcacagtctccgtcttcagcactcgcctggcatcgcgcgcacgcatcgcgaccatg
ccttgcttccggacactcacccgcgtgcctcgcaatcgtccacataccttcgcctgcgcg
ctgctgctctatgccggcgtcagcgcacctgcgctggccgacttcgggatcagccgcagc
ggcgaccgcgtgatcgtcgacagcggcgccgagctggtgtttgcggtcgatgcccggaat
ggcgacatcgtctcgatgcgctatcgcgacaacgaactgcagaccaccgaatcgaagggc
tcgcacatcgcttcggggctgggcagtgccagtgtggatgcacgcatcgttggcgggacg
atcgtggtgtcggccaaggccggcgacttggtccagtactacatcgcgcgcaagggccgc
aacgcgatctacatggccaccgatgcgccaagcttgatgccggtgggcgaattgcgcttc
gtcgcccgcttgaacgtgtccacgttgccgaatgcgcagcaggagcccgattccaatgtc
ggcaaagcgatcgaaggcaacgatgtctttctattgccggatgggcgcaccagttccaag
ttctattccgcccgtcgaatgatggacgaccaggtgcatggcgtcagcggctctggcgtt
gccgtgttcatgctgacgggcaaccgcgagcgcagcgcgggcggcccgttcttcaaggac
atcgcgacacagaaaaccagcgtgacgcatgagctctatcactacatgtattccgatcac
acccagaccgaagcgtttcgcggcggcctgcacggtgtgtacgggctgctgttcaccgat
gggagctcgccgtcgagtgcgcaactggacaccgccttcgtcgatgccacgctgggcctg
agcggttatttgccggcaagcgggcgcggcaccgtgagcgggcacgtcggcggcgtgttg
ccgggccagccggccgtcatcggtctgcgcaatgcgcaggcgcagtactgggccactgcc
gacggcagcggcgactaccgggtgacgggtgttcgcccgggcagctatcgcatgacgctc
taccagaacgaactagacgtcgcacaacgcaacatcgaggtttccgccggcgccactgcg
cacgccgcactgcaggcagtcgttttgccgggcacggtgaagtggcagatcggcattccc
gatggcacgccggcagggttcagatatgcggacctgttaccgcgggcgcacccttccgat
gcgcgcatgcactggtctgcggtgacctacaccgtgggatcgagcagcctgagcagcttt
ccggcggtgcagtggcgcggcatcaacaccccgagccggatcgacttcaccctgcccgcc
aacgaggtgcgcggctatcgcctgcgtatcttcgtgccgttggcacagggcagcgcacgt
ccgcagatcagcgtgaatgcacgctggaacggctcggtgcctgccgcgcccacgcagcca
aagacacgcggcatcacgcgcggcactgcgcgtggcaacaacaccctgtacgaagtggac
atccccgcctctgccttgcatgccggcaacaaccgcatcgagatcggcattgcctccggc
tccccggacaacggttacctcagcccggcaatcgtgttcgacagcatccagctggtagcg
ttatag
DBGET
integrated database retrieval system
