Xanthomonas axonopodis Xac29-1: XAC29_19345
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Entry
XAC29_19345 CDS
T02500
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xao
Xanthomonas axonopodis Xac29-1
Brite
KEGG Orthology (KO) [BR:
xao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xao03032
]
XAC29_19345
03400 DNA repair and recombination proteins [BR:
xao03400
]
XAC29_19345
Enzymes [BR:
xao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XAC29_19345
DNA replication proteins [BR:
xao03032
]
Prokaryotic type
DNA Topoisomerases
XAC29_19345
DNA repair and recombination proteins [BR:
xao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XAC29_19345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AGH79268
LinkDB
All DBs
Position
4485349..4487841
Genome browser
AA seq
830 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKN
EKHVEAIARAAKGADDIFLATDPDREGEAISWHIAEILKERGLLKDKPMQRVVFTEITPR
AIKEAMAKPRMIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIPREYWSIDAHCRHPSQAFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ
AAQGVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRP
TSALRTPAQVARFLSEDERRLYELIWRRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDTKSSEDEDEGRKLPLMKAGDNVPLDRIVTDQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDF
TANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGTDPVSGKE
VSARIGRFGPMVQIGTVEDEDKPTFASLRPGQSIYSISLEDALELFKMPRALGQDKDQDV
SVGIGRFGPFARRGSTYASLKKEDDPYTIDLARAIFLIEEKEEIARNRVIKEFDGSDIQV
LNGRFGPYISDGKLNGRIPKDREPASLTFEEVQQLLADTGKPVRKGFGAKKATLKKNTVK
DSAPKKPAVKKTATKTAASKTAVKKAPAKKTATKKAAKRVVKKTVSKAAG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaataaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgcgacctggtccccaag
gaaggcgcggtcgatccggacaacggctttgcgatgcgttacgacctcatcgagaagaac
gagaagcacgtcgaagccatcgcgcgtgccgccaagggtgccgacgacatctttctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaggag
cgcggcctgctcaaggacaagccgatgcagcgggtggtgttcaccgaaatcaccccgcgt
gcgatcaaggaggcgatggccaagccacgcatgatcgccggcgacctggtggatgcgcag
caggcgcgccgcgcgctcgattacctggtcggcttcaatctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgctggccgcgtgcaatcgccggcgctgcgtatgatcgtc
gagcgcgaagaagagatcgaagccttcatcccgcgcgagtactggtccatcgatgcgcat
tgccggcatccctcgcaggcgttcaacgcgcgactgatcaagctggatgggcagaagttc
gagcagttcaccgtgaccgacggcgacaccgccgaggcggcgcgcctgcgcatccagcag
gccgcgcaaggcgtgctgcatgtcaccgacgtggccagcaaggagcgcaagcgccgccct
gccccgccgttcacgacctccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagttgtacgaaggcgtggcactcggcgacgaa
ggctcggtcggtctgatcagctatatgcgtaccgactcggtgaacctgtcgcaggacgcc
ctggcggaaatccgcgatgtgatcgcgcgcgacttcggcaccgcttcgctccccgaccag
cccaacgcctacaccaccaaatccaagaacgcgcaggaagcccacgaagcggtgcgcccg
acctccgcgctgcgcaccccggcgcaggtggcgcgtttcctgtccgaggacgagcgccgc
ctgtacgagctgatctggcgccgcgcagtggcctgccagatgattccggccacgctcaat
accgtcagcgtggatctgtcggccggcagcgagcacgtgttccgcgccagcggcaccacc
gtggtggtcccgggcttcctggccgtgtacgaagaaggcaaggacaccaagagcagcgag
gacgaggacgaaggccgcaagctgccgctgatgaaggccggcgacaacgtcccgctggac
cgcatcgtcaccgaccagcacttcacccagccgccgccgcgtttcaccgaagcggcgctg
gtcaaggcgctggaggaatacggcatcggccgtccctccacctacgcctcgatcatccag
accctgcagttccgcaaatacgtcgagatggaaggccgcagcttccgtcccaccgacgtg
ggccgtgcagtgtccaagttcctgtccgggcatttcacccgctacgtcgattacgacttc
accgccaatctggaagacgatctggacgcggtgtcgcgcggcgaagccgagtggatcccg
ttgatggagaagttctggggcccgttcaaggaattggtcgaagacaagaaagactcgctg
gacaagaccgatgccggcagcgtgcgcgtgctcggcaccgacccggtcagcggcaaggaa
gtcagcgcgcgcatcggtcgcttcggcccgatggtgcagatcggcacggtcgaagacgag
gacaagcccaccttcgcgtcgctgcgtccgggccagagcatctattcgatctccctcgaa
gatgcgctggaactgttcaagatgccgcgcgcgctgggccaggacaaggaccaggatgtc
agcgtgggcatcggccgtttcggcccgttcgcgcggcgcggcagcacctatgcctcgctg
aagaaggaagacgacccctacaccatcgacctggcgcgcgccatcttcctgatcgaagag
aaggaagagattgcacgcaaccgggtgatcaaggaattcgacggcagcgacatccaggtg
ctcaacggccgcttcggcccctacatcagcgacggcaagctcaatggcaggatccccaag
gaccgtgagccggcgtcgttgacgttcgaagaagtgcagcagctgctggccgacaccggc
aagccggtgcgcaagggcttcggcgccaagaaggccaccctgaagaagaatacggtcaag
gattcggcgccgaagaagcctgccgtcaagaagaccgcgaccaagaccgcggccagcaag
accgctgtcaagaaggcgccagccaagaagacggccaccaagaaggccgccaagcgcgtg
gtcaagaaaaccgtgagcaaggccgcgggctga
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