Xanthomonas axonopodis Xac29-1: XAC29_22654
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Entry
XAC29_22654 CDS
T02500
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xao
Xanthomonas axonopodis Xac29-1
Brite
KEGG Orthology (KO) [BR:
xao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xao03032
]
XAC29_22654
03400 DNA repair and recombination proteins [BR:
xao03400
]
XAC29_22654
Enzymes [BR:
xao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XAC29_22654
DNA replication proteins [BR:
xao03032
]
Prokaryotic type
DNA Topoisomerases
XAC29_22654
DNA repair and recombination proteins [BR:
xao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XAC29_22654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_recom
Zn_ribbon_TFIIB
HVO_2753_ZBP
Zn_ribbon_Top1
DUF7340
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AGH79884
LinkDB
All DBs
Position
pXAC47:complement(29084..31456)
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AA seq
790 aa
AA seq
DB search
MKLMVVESPNKVASIQGYLGDDWKVVASVGHIRDLPQREFGISKPDFSLQYEYIPPQKVG
DRTFPGAAERVARIKREVAKAEVVYLATDPDREGEAISWHLKEALQLGEGDYERVTFTEI
TPKAIQASLRAARRIDMDLVHAQEGRRALDRFVGYMVSPLLSDMLGMSLSAGRVQSVAVR
LVVELERRIAAFKSTKHFGAVVMFDAGGGAKWSAQWDTKPYVTEDSPYVLDAALAAKASQ
SRQFVVLEAKTEEKSERPPSPLSTLGMLRAASTVLKMSSAATTKAAQKLFEDGHITYIRT
DSVNLSPDAADKVRSFAASQGMALSPDVRRWKEKASAQGGHADAVRPTHIEVEDAGADEA
QRALYRLIRLRTLVSQLPDARYTVNTVRLRATDRDGFEYVARGRKMIDAGWRALLERDPD
EEENSDEDGAKDGQVPRLAVGGDLRAIDGKVLDKKTEPPRRFTEGTLLQKLEDEGVGRPA
TFAAIMTNVLGRSYVELDKKRYLLPTEIGELVVDNLLRGQFGFMELGFTRELEVQLDAIA
EGKASYRDVVEPAYTQLNEELARIAVSGEFTPRFKCPKCGTGMRRYAKPGKSPFWRCTAD
AETCGHYMDDDKGKPVERAAHPCPRCGETLRRFKRKSGGGLVWVCPAEACETFLDDVGGK
PVALHTCSKCSAPLRRYQKKDRETGKPTGAFGWFCTDTENCKTFMDDDKGRPVAIKKAPC
PKCGKAMYRRKGDHGWWWGCSGYREGCKTIMDDDKGKPVPRAAKGATKSTSSPAKAKAKA
KPAAKPKVRR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatggtggtggagagtccgaataaggttgccagtatccaaggttatctcggc
gacgattggaaggtggtcgcgagtgtgggccatattcgcgacttgccgcagcgcgaattt
ggcatcagcaagcctgatttttcgcttcagtacgaatacatcccgccgcagaaagtcggc
gaccgcacgttccctggcgctgctgagcgcgtggcacggatcaaacgcgaggtcgcgaaa
gccgaggtcgtctacctcgcgaccgatccggaccgcgagggcgaagcgatctcctggcat
ctgaaggaggcgcttcagctcggcgaaggcgactacgagcgtgtgacgttcaccgagatc
acgccgaaggcgatccaagcctcgctccgcgccgcccggcgcatcgacatggatctcgtg
catgcccaagaagggcggcgcgccctcgatcggttcgtgggctacatggtgtcgccgttg
ctgtcggacatgctcggcatgtccctctctgcaggcagggttcagagcgtggcggtgcgc
ctggtggtggagttggaacgccgcatcgcggcgttcaaatccaccaagcatttcggcgcg
gtggtgatgttcgacgccggcggcggcgcgaaatggtcggcgcagtgggacacgaagccg
tatgtgaccgaggacagcccgtatgtgctggacgcggcgctggccgcgaaggcatcgcag
tcgcggcaattcgtggtcctggaggccaagacggaagagaagtcggaacggccgccgtcg
ccactttcgacgctcggcatgctgcgcgcagctagcacagtcctgaagatgagttctgcc
gcgacgacgaaggcggcgcaaaagctctttgaggatggccatatcacgtacatccgcacc
gacagcgtgaacctgagtccggatgctgcggacaaggtgcgtagcttcgcggcaagccag
gggatggcgctatcgccagacgtgcgcaggtggaaggagaaggccagcgcgcagggcggt
cacgccgacgcggtgcggccgacgcacatcgaggtcgaggacgctggcgcggacgaagcc
cagcgggcgctctatcggttgatccggctgcgcaccctggtgtcgcaactgcctgacgcg
cggtacaccgtcaatacggtgcgcctacgcgccaccgatcgcgacggcttcgagtacgtc
gcgcgtggccgcaagatgatcgatgccgggtggcgtgcgctgctggagcgcgatccggac
gaggaagaaaacagcgacgaagacggcgcgaaggacggccaggttccacgcctggctgtt
ggtggcgatctgcgcgcgatcgacggcaaggtgctggacaagaagacggagccgccgcgc
cgtttcactgagggcaccttgcttcaaaagcttgaggacgaaggagtcggccggccggcg
acattcgcagcgatcatgacgaacgtgctgggccgcagctacgtcgagctggacaagaag
cgatacctgctgccaaccgagatcggcgagctggtggtggacaacctgctgcgcggccaa
ttcggtttcatggagctgggtttcacccgcgagcttgaggtgcagctagacgccatcgcc
gaaggcaaggcgtcatatcgcgacgtggtggaaccggcctacacgcagttgaacgaggaa
ctggcgcgcatcgcggtcagcggcgagttcacgccccgcttcaaatgcccgaagtgcggc
acgggcatgcgtcgttacgccaagcccggcaagtcgccgttctggcgctgcacggccgat
gctgagacgtgcggccactacatggacgacgacaagggcaagccggtcgagcgagcggcg
cacccgtgtcctcgctgtggtgagacgctccggcgcttcaagcgcaagtcaggtggcggc
ctggtgtgggtctgcccggcagaggcttgcgagacgttcctggacgacgtgggcggcaag
cctgtcgccctgcacacctgctccaagtgcagcgcgccgctgaggcgataccagaagaag
gatcgcgagaccggcaagccgacaggcgcctttggctggttctgcaccgacaccgagaac
tgcaagaccttcatggacgacgacaagggccggcccgtcgcgatcaagaaagcgccgtgc
ccgaagtgcggcaaggcgatgtaccgccgcaagggcgaccatggctggtggtggggctgt
agcggctaccgtgagggctgcaagaccatcatggacgacgacaagggcaagcccgtgccg
agggcggccaagggtgccaccaagtccaccagctcgccggcgaaggccaaggccaaggcc
aagcctgcggctaagccgaaggtgcgccggtag
DBGET
integrated database retrieval system
