Xylocopilactobacillus apicola: XA3_05870
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Entry
XA3_05870 CDS
T09717
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
xap
Xylocopilactobacillus apicola
Pathway
xap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XA3_05870 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xap03400
]
XA3_05870 (xseA)
Enzymes [BR:
xap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
XA3_05870 (xseA)
DNA repair and recombination proteins [BR:
xap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
XA3_05870 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BDR58146
UniProt:
A0AAU9D0C7
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All DBs
Position
575170..576552
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AA seq
460 aa
AA seq
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MEQNQTNYDQFLSVSQITAYIGKKFSQDPYLDQVNIKGEITNFRERPNGHQYFSLKDDGA
KIGVTLFRNIYQKINFKLKDGDMIACTGRINVYAPGGSYSLIVESLEPYGLGTLLVQLQE
RKEKLAKMGVFAPERKRPICRFPKRIAVITSPSGAVIRDIITTTKRRFPLVKLVLFPAVV
QGDQAANSVLHQLKQANELGDFDTIIIARGGGSFEDLWPFNDEALTVAVAKSQIPVITSV
GHETDTTLVDYAADLRAPTPTAAAELATPRRDELQQMLIQLRSALKQAELGYLANLTAKV
RPLTQSYLFRRPEAFYQNQLISLDHLTELLRRSESQTINKNLNLLQSLTQRLKSFAPERL
VRQLTLEREQQNNSMQRAMRTYLQNKKGEFANLSQNLVMLDPHQVLKRGYAIAENEEHKV
IDSIKKTAVKQKVRLILSDGAIISTVNEIEGEENGHEKNS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaatcagactaattacgatcagtttttaagtgtcagtcaaattacagcttat
attggcaaaaaatttagccaagatccttatttagatcaggttaatattaaaggtgagatt
acaaattttagagagcgacctaatggacatcagtattttagtttaaaagacgatggtgcc
aaaattggggtcactctttttcgtaatatttaccaaaaaattaacttcaagttaaaagac
ggcgatatgatagcttgtacagggcggatcaacgtttacgcgccagggggaagttattcc
ttaatcgttgaatcgttagaaccgtacggcctgggcactcttttggtgcagttacaggaa
cgtaaggaaaaattggctaagatgggtgtttttgcgcccgaacgaaaacgcccaatttgt
cgttttccaaagcgaattgctgtcatcacaagtcccagcggtgcggttatcagagatatt
atcacaacaactaaacgaagatttcctttagtgaagctggttttatttccagcggtggtt
caaggagatcaggcggctaattcggtgctgcatcaattaaagcaggcaaatgaattgggt
gatttcgatacgataattattgctcgcggtggcgggtcgtttgaagatctatggcccttt
aatgatgaagctttaaccgttgcggttgccaagagccaaatcccagttataacttctgtt
ggtcatgaaactgatacaactttagttgattatgcagccgatcttagagctccgacgccg
acagcggcagccgagcttgcgactccaagacgagatgagctacagcagatgcttattcag
ttgcgtagcgcattaaagcaggcagagctagggtatttggctaacttgacagctaaagtt
cgtccgctgactcaaagttacctgtttcgtcgaccggaggctttttatcagaatcaatta
atttctttagaccatctcaccgagttgcttagaagaagtgaaagccaaacgataaataag
aatttaaatttattgcaatcacttactcagcggctaaaatcttttgcgcctgaacgtcta
gtgcgtcaactgacacttgagcgcgagcagcaaaataattcaatgcagcgggcaatgagg
acgtacttacagaataaaaaaggtgaatttgctaatttgagtcagaatttggtgatgttg
gatccacatcaagttttaaagcggggctatgctatcgctgaaaatgaagaacataaagta
attgatagtattaagaagacggcggtgaagcagaaagttcgcttgattttaagtgatggc
gcaattatttcaaccgtcaatgagattgaaggagaagaaaatggtcacgaaaaaaacagc
tga
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