Xylocopilactobacillus apicola: XA3_06820
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Entry
XA3_06820 CDS
T09717
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xap
Xylocopilactobacillus apicola
Pathway
xap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XA3_06820 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xap03400
]
XA3_06820 (recD2)
Enzymes [BR:
xap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XA3_06820 (recD2)
DNA repair and recombination proteins [BR:
xap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XA3_06820 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
OB_YrrC
UvrD_C_2
HHH_RecD2
Viral_helicase1
SH3_13
AAA_11
AAA_22
AAA
UvrD-helicase
AAA_28
5_3_exonuc
DEAD
nSTAND3
HHH_5
AAA_16
HHH
RecR_HhH
UvrD_C
AAA_29
SMC_N
SLFN-g3_helicase
NPHP3_N
NTPase_1
Mg_chelatase
HHH_8
AAA_17
AAA_18
T2SSE
Cdd1
ATP_bind_1
IMS_HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDR58241
UniProt:
A0AAU9D779
LinkDB
All DBs
Position
668958..671312
Genome browser
AA seq
784 aa
AA seq
DB search
MEEKQKSVTGKVKKIIFRNLKDQFFIISVNIAEISFDFGQEEIVITGTMPGLAEGLTYKF
IGSLTKHPKYGQQFKAQSYEIAAEPDDPSAVVKFLVSRELPGIGEKTAQKIVDKLGVNAV
DEIINNPDSLNGFRINPERKKEIREKLTEDVELNKVLLAFSRFHISQAAAIDAYNLYGLE
AINILNDNPYYFLGRVPRLSFNQIDQSCKLIDLDVSESERITGALKWVASEMINRSGSTL
IETERVLRNTNWVLGENSGATVNEEFVEKCLNENDEDFFSFDKDFVTTQDYSNYENEIAN
SINQLNHPFEENDEILNSEITEFEKKTDLQLEHYQKKAITSAFKNNLSIITGGPGTGKTT
IVRAIIEIFADLHHLNLQEQESEEDSGILLTAPTGKAAKSLSDKTKFPAATIHRLLKVRD
VEDRNSETDLISPDLLIIDEMSLVDTGLFAQLLRSIKTKPTVIMLGDVDQLPSVGPGQVF
KDLIDSDVIPTTTLQRNFRQDLGGNIINFANLINSGEIYDSMEDNYDDLKMISAKGEEIV
PALEKIVKAEIAAGTPITELQILAPMYKNKGGIFEINDSIHQLVNPQKFKINGFAVGDKV
IQLENVPEKDVYNGEIGIVQRVEQLHGRRITKVLFDQEHEISYEPDELNQLTLAYAISIH
KAQGSEFKTVIVTMSGRFDTMLRRNLLYTAVTRARDHLYLVGDLTTFIRAAGLPSTIRLT
GLVNKLQRRLDAKVEAEEFVKHVETKVLPKVKEKPETAEKKAYVLTTENYQLIDPMIGME
QIKP
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaacaaaaatccgttactggtaaagtaaaaaaaataatttttagaaattta
aaagatcaattctttataatctcagtaaatattgctgagatttcttttgatttcggtcaa
gaagaaattgtaatcaccgggacgatgcccggacttgctgagggattgacttataaattt
attggtagtttaactaaacatcctaaatatggtcaacaatttaaggcgcaaagttatgaa
attgctgctgagccagatgatccatcggcagtggtgaaatttttagtttcgcgggagttg
cccggaatcggagaaaagactgcccagaaaatagttgataaattaggggttaatgcggtc
gatgaaattattaataatcctgacagtctcaacggctttcggattaatccagagcgaaaa
aaagagatcagggaaaagctaacagaagatgtagagcttaacaaggttctcttggcattt
agccgatttcatatttctcaagccgccgccattgatgcatacaatttatatggccttgaa
gcgatcaatattttaaatgataatccgtattattttttaggccgggttccgcggttatct
ttcaatcaaattgatcagtcctgtaaattgattgatttggatgtttctgaatcagaacgg
atcactggagccttaaagtgggttgcaagtgagatgattaaccgttctggcagtacttta
attgaaacggagcgggttttgcgcaatactaattgggtattaggagaaaacagtggtgca
acggtcaatgaagaatttgttgagaagtgtttaaacgagaatgatgaagattttttttcg
tttgataaagatttcgtaaccacgcaggactattcaaattatgaaaatgaaattgctaat
tccatcaatcaattaaaccatccattcgaagagaatgatgaaattttaaactctgaaatt
actgaatttgaaaaaaagacggatttacagcttgagcattatcaaaaaaaggcgattacg
agcgcttttaaaaataatttaagtattattaccggtggacctgggaccggaaaaacgaca
attgtacgagcgattattgaaatttttgctgatctgcatcatttaaatcttcaagaacaa
gagagcgaggaagattcagggatccttttaaccgcaccgactggcaaagcagcgaagtct
ttaagtgataaaactaagtttcctgctgcaaccattcaccgtcttctaaaagttagagat
gttgaagatcgcaattctgaaaccgatttaattagtccagacttattgattatcgacgag
atgtctttggttgatacaggactatttgcgcaactattacgttcaattaagaccaagcca
accgtaattatgctcggagatgttgatcagctaccttcagtagggccaggccaagtattt
aaagatttaattgatagcgatgttattcctactactactcttcaaaggaactttcggcag
gatttgggtggaaatattattaatttcgcaaatttgataaattcgggcgaaatttacgat
agcatggaagataattatgatgatttgaaaatgatttcagccaaaggtgaagagattgtt
ccggcattagagaaaattgtgaaggctgaaattgctgcaggcactccaattacagaatta
caaattctagcccccatgtacaagaataaaggggggattttcgaaattaacgattcaatt
catcagcttgttaacccgcaaaagtttaaaataaatggttttgcggtgggtgataaagta
attcaattagaaaatgtgccagaaaaggacgtttacaacggagaaataggaattgttcag
cgtgttgagcaactacatggtcgcagaatcactaaagttctttttgatcaagaacacgaa
atttcttatgagccagacgaattaaatcagctgactcttgcatatgcaatttcgattcac
aaagctcaaggtagtgaatttaaaacagttattgtcacaatgagtgggcgttttgataca
atgcttaggcgtaatttattgtacacagccgtaaccagagcgcgagatcatctctatctt
gtaggggatctaacaacttttattagggccgcaggtttgccatcgacgattcgcttgaca
ggtctagtaaataaattacaacgcagacttgatgcaaaagttgaagcagaggagtttgta
aaacatgttgaaacgaaggtgcttccgaaagttaaagaaaaacccgaaacagcagaaaaa
aaggcttatgttttgacgacagaaaactatcagttaattgatccgatgattgggatggag
caaatcaaaccataa
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