Xylocopilactobacillus apicola: XA3_08350
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Entry
XA3_08350 CDS
T09717
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
xap
Xylocopilactobacillus apicola
Pathway
xap03030
DNA replication
xap03430
Mismatch repair
xap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XA3_08350 (polC)
03430 Mismatch repair
XA3_08350 (polC)
03440 Homologous recombination
XA3_08350 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xap03032
]
XA3_08350 (polC)
03400 DNA repair and recombination proteins [BR:
xap03400
]
XA3_08350 (polC)
Enzymes [BR:
xap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XA3_08350 (polC)
DNA replication proteins [BR:
xap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XA3_08350 (polC)
DNA repair and recombination proteins [BR:
xap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XA3_08350 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
RNase_H_2
tRNA_anti-codon
DNA_pol3_a_NI
DEDDh_C
HHH_3
Zn_ribbon_8
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
BDR58394
UniProt:
A0AAU9CWP5
LinkDB
All DBs
Position
831859..836151
Genome browser
AA seq
1430 aa
AA seq
DB search
MSDKKLIKLADLFAKLTLEPEFSEELNLDQLWLERLLIHRISNSWDFFVVGENFLPVSAY
LELNNILKNLAQSKTIDLHLNYKNDLPEDSWYQDYYPTMVGNLSHYQNILLNQNAIFAEN
KLQIIFNQEFIYKMMNKEVEAEIAGIYQKFGFPAPNVEFVIDQNSEEEKSKEFLAKKKQE
NDLAFQSLQKQLAAAPPASTPVRKRSSKDDKNITGKVVPINEIEGPTSTIVLEGQIFKSD
QRAIKNKNYILTFEIYDGTDSILLKKFAGENELADYKDLKPGVWVKAKGKIQNDQFTENL
TMNLYNIQQIPSPPARRDNYEGQKRVELHLHSNMSQMDAITPVGNFAKRVADFGQKGFAL
TDHANLQAYPETYYSTQKTGIKAIYGVEANLVDDYTHIIYNSTHEAPEEVTFVVFDIETT
GLSVEFNEIIEIGAVKFAGGKKVGEFQEFINIGKPLSEFTKELTSITDENIRSGKSNSEV
MTNFHEFIDGAVLVGHNVRFDWDFIDKNFERLNLSKVQRPVIDTMGLGRFLYPELANVRL
ETLAKKVGISLTHHHRAIDDAEGTYEIFFKMLAEFQKTHELKELSDLDQHLDLTSTYRQV
RPTHVILLAQTQKGLKNLFKIVSDAHTKYYYRVPRVPRSILNEYREGILVGSACDQGEVF
DSASLKDDEDTLRVAKFYDYLEIQPLGNYEHLIRNQRLTAEQLQEVIQKIIRIGAKLQIP
VVATGDVHYLDPSDFKFREVLLASQSMTAKRSRNLPELYLRTTQEMLDEFAFLGEETAKQ
VVITASNEIFDRIEDVVPLKDKLYTPNIEGVDQNLRDAAYDRMHELYGDNPPEVVENRLK
TELDSVIGNGFAVIYYISRELVKKSNKDGYLVGSRGSVGSSFAATMLGITEVNPLPPHYR
CPDCHYSEFFLHGEYASGYDLPDQKCPECGAELAKDGQDIPFATFLGFNGEKVPDIDLNF
SGDYQPVAHNYIKVLFGEDHAYRAGTIGTVAEKTAYGYVKAFERERNISLKQTEIDRLAS
GITGVKRTTGQHPAGILIVPQEMDIYDFTPIQYPADKVDSAWETTHFEFSSIHDNILKVD
CLGHDDPTVIRMLQDLSGIDPVTIPTDDPEVLSLFSSPKALGVTAEEIGSKTGTLGIPEF
GTGFVRGMLEETHPHNFSELLQISGLSHGTDVWRGNAEELITKKNVTIDKVIGCRDNIMM
DLIHWEVEPSTAFRVMEDVRKGRGVKPDDEEVLKKNPKVPSWYLDSCKKIKYMFPKAHAA
AYVLMALRIAYFKVYFPILYYDVFFSIRTNDYDISLMSTGQAAIKGRLDELNEKIQSGEA
TMIDKSSRTSLEVANESLCRGIKYKMVDLNQSDAFQFKIIDDQTLLAPFISIPGLGANVA
KQVVLARSEHPFTSKKDLLQRGKISRTVLDYLDENKVTADLPEDDQLTLF
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgataaaaaattgattaagttagctgatctttttgctaaactgactttagagccc
gaattttcagaggagcttaatttagatcagctttggttggaaagattattaatccatcgc
atctcaaattcttgggatttttttgttgtaggagagaattttctaccagtttctgcttat
ttggagctaaataatattttaaaaaatttagctcagagtaaaactattgatctacatctc
aattataaaaatgatctacctgaagactcatggtatcaagactactacccaacaatggtt
ggaaatctttcacattatcagaatattttgcttaatcaaaatgctatttttgctgaaaac
aaattacaaatcatttttaatcaagaatttatttataagatgatgaataaagaagtggag
gcagaaattgcgggaatttaccaaaaatttggttttcctgcgcctaacgttgaatttgtg
attgatcaaaattctgaggaagaaaaatcaaaagaattcctggcaaagaaaaagcaagaa
aacgatcttgcgtttcagtcgcttcaaaagcaattagcagcagcgcctccagctagcact
ccagtcagaaagagaagcagcaaggacgacaaaaatatcactggaaaagttgtcccaatt
aatgaaattgaaggaccgacttcgacaattgtgctcgaaggacaaatttttaaatctgat
cagcgagcaattaagaataaaaattacattttaacttttgagatttacgacggcactgat
tcaattttattgaaaaagtttgctggtgaaaatgagttagctgattataaagacttgaaa
ccaggagtttgggttaaagccaaggggaaaattcaaaacgatcagttcactgaaaattta
acgatgaatttatataatattcaacaaatcccctcaccaccagctcgtcgagataattac
gaaggtcaaaaacgagtcgaacttcatttgcattcgaatatgagccaaatggatgcaatt
acgcccgttggtaattttgctaaaagagtagctgattttgggcaaaaaggttttgcattg
accgatcatgcaaatttgcaggcatatcctgaaacatattattctactcaaaaaaccggt
atcaaggctatttacggcgtggaagctaatttagtcgacgattatacgcacataatttat
aattcaacacatgaagctcctgaagaagtaacctttgtagtttttgatattgaaactaca
ggattatctgttgaatttaatgagattatcgaaattggggccgtgaaatttgcaggtgga
aaaaaagttggagagtttcaggaatttattaacatcggcaaacctctaagtgaatttacg
aaggaattgaccagtataactgacgaaaatattcgtagtggtaaatcaaattcggaggtg
atgaccaattttcatgaattcattgacggggcagttctggttggtcacaatgtacgtttt
gattgggattttattgataaaaacttcgaacgacttaatttaagtaaagttcagcgacca
gtaatcgatacgatgggactggggcgatttttgtatccagaattagctaatgtccgacta
gaaactttagcgaaaaaagttgggatttctttaactcaccatcaccgggcgattgatgac
gctgaaggtacttatgaaattttctttaaaatgttggcagaatttcaaaagacgcacgaa
ttaaaagaattaagtgatttggatcagcatttggacttaactagtacctatcgtcaggtt
cgaccgacgcacgtaattttgcttgctcaaacccaaaagggactcaagaatttgtttaaa
atcgtctctgatgcccatacaaagtattattatcgggtgccaagggttcctcgttctatt
ttgaacgaatatcgcgaaggaattttagtcggtagtgcctgtgatcagggagaagttttt
gattcagcctctttaaaagatgacgaagataccctgagagtagctaagttttatgattat
ttggaaattcaaccccttggtaattatgaacatttgattagaaatcaacggttaacagca
gaacaattgcaagaagtgattcaaaagattatccgaatcggggcaaaattacaaattcca
gttgtagcaacgggagatgttcattatttggatccgagcgattttaaatttcgagaagtt
cttcttgcatctcagtcaatgacggcaaaacgtagtcgaaatttacctgaattgtatctc
cggacaacacaggaaatgttagatgaatttgcttttttgggtgaagagaccgccaagcaa
gtggtgattactgccagtaatgaaatttttgatcgaattgaagatgttgtccctttaaag
gataaactgtacacgccaaatattgaaggtgttgatcagaatttacgtgatgcagcttat
gatcgcatgcatgagttgtatggggacaatccgccagaagtagttgaaaatcgcttaaaa
accgagttagatagcgtaatcggaaatggatttgctgttatatactatatttcgcgcgaa
ctagtaaaaaagagtaataaagatgggtacttggttggttcccgggggtcagttggttca
agttttgctgcaacgatgctagggattacggaagttaatccattgccaccacactatcgc
tgtccagattgtcattattctgaattctttttgcacggagaatatgcttcaggttatgat
ttgcctgatcaaaaatgccctgaatgtggtgccgaattggctaaagatggacaagatatt
ccatttgcgacttttttaggtttcaacggagaaaaagttcccgatattgatttgaatttc
tctggcgattaccagccagttgctcacaattacattaaagttttgtttggggaagatcat
gcttatcgtgctggaacgattggaaccgttgctgaaaaaactgcttatgggtatgttaaa
gcctttgagcgtgaacgaaatatttcgttaaaacaaacggaaattgatcggctcgctagt
ggaatcaccggggtaaagcggacgactggccagcatccggccggcattttgattgttcct
caagagatggatatttatgattttactccgatccaatatccggctgataaagttgattca
gcttgggaaactactcattttgaatttagttcgattcacgataatattttaaaagttgat
tgtcttggtcatgatgatccgaccgtaattagaatgttgcaggacttgtctggtattgat
ccggtaacaattccaactgatgacccagaggttttatccttgttttcttcacctaaagca
ctgggagttacggcagaagaaattggttcaaaaacgggaacccttggaatccctgagttt
gggacgggttttgttcggggaatgttagaagaaactcatccgcataatttctctgaacta
ttgcaaatttcaggcctttctcatggaactgacgtttggcgtggtaatgctgaggagttg
attacaaagaaaaacgtcacgatcgataaagtaattggttgtcgggataatattatgatg
gatttaattcactgggaagtggaaccaagtacagcattccgtgtgatggaagatgttcgt
aaaggccgtggtgttaaaccagatgatgaagaagtattaaagaaaaatccgaaggttcct
tcgtggtatttggattcttgtaaaaagattaagtatatgtttccgaaagctcatgcggca
gcttatgtcttaatggctttgcgaattgcttattttaaagtttattttccgattttatat
tatgatgttttcttttcaattcggactaatgattatgatatcagtctgatgagcacaggc
caagctgcaataaaggggcgtttggatgaattaaatgaaaaaattcaaagtggcgaagcc
acaatgattgataaaagcagtcgaacttcacttgaagttgctaacgagtctttgtgccgc
gggatcaaatataaaatggtcgatttgaatcaatcggatgcttttcaatttaaaataatt
gatgatcaaacgcttttagctccatttatctctattcctggcctaggagcaaacgttgct
aaacaggtagttctggctcgcagtgaacatccttttacttcgaaaaaagatttgcttcaa
agaggaaaaatatcgcggacagttctagattacttggatgaaaacaaagttacggctgac
ttaccagaagatgaccagttaactctgttttaa
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