Xylocopilactobacillus apicola: XA3_09020
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Entry
XA3_09020 CDS
T09717
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
xap
Xylocopilactobacillus apicola
Brite
KEGG Orthology (KO) [BR:
xap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xap03009
]
XA3_09020
Enzymes [BR:
xap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
XA3_09020
Ribosome biogenesis [BR:
xap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XA3_09020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Cons_hypoth95
Methyltransf_4
TRM5-TYW2_MTfase
RrnaAD
PCMT
MTS
DASH_Duo1
DOT1
FtsK_alpha
DUF4932
N6_N4_Mtase
PrmA
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
BDR58461
UniProt:
A0AAU9D170
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Position
911265..912623
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AA seq
452 aa
AA seq
DB search
MLKKNDKLTVTISALTYAGLGFVKINEFPVFIYNSLPGEEVEIQILKVLKKYAFARVVKF
LSYSPDRNQEIDYHSIQSGLAPLSHLKYQAQLSFKENQIKETLHKFGIDNPVESIIPSPK
ETHYRNKSQVPVRLVKGQLSVGFFRAHSHHLVPTEDFLLQESVIDQNIIKVRDILRKLEI
SSYDEDTQRGVVRNIMLRFGKFTGELMLILVVNQKDVPRLKKLKHELQSSCPEITSFILN
YNFKNTNVILGPTNKVIYGSPYLTDKILTNTFKISPLSFYQVNPLQTENLYRIAAEYGNL
KSTDTVMDAYSGIGTVGISLADRVKQVIGVESVQQAVEDALNNAQLNHYDNVKYVCGKAE
EVIDQWISEGLKVNKIFVDPPRKGLAKNFIEQSVKMQPEIIVYVSCNPATLGRDLAIYKE
LGYAIKKIQPVDLFPQTTHVESVTMLEKNRTF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaaaaagaatgataaattaactgtaacaatttctgcattaacatacgcgggactg
ggatttgttaaaataaacgaatttccagtctttatttataactcacttccgggtgaagaa
gttgagatccaaattttaaaggttctaaaaaaatatgcttttgctcgggttgttaagttt
ttaagctactctcctgatcgaaatcaagaaattgattaccatagtattcaaagcggctta
gcacctttaagtcatctcaagtatcaggcacagttaagttttaaagaaaatcaaatcaag
gaaacactccataaatttgggattgataacccagttgaatcgataattccttcgcctaaa
gaaacgcattaccgtaataaatctcaggttccggttcgacttgtaaaaggtcaattatcg
gttggtttttttagagcccactcacatcatttagtaccgacagaagattttttactgcaa
gaatcagttattgatcaaaatattatcaaagttcgggatattttacgaaagctagaaata
tcttcctatgatgaagatactcaacgcggcgtcgtccggaatattatgctccgttttggt
aaatttacgggggaattgatgttaatcttagtggtcaatcaaaaagatgtacctcgttta
aagaaacttaaacatgaactacagagtagctgccctgaaattacgagttttattcttaat
tacaatttcaaaaatactaacgttattttaggtccgactaataaagttatttatggttca
ccgtatttaactgataaaattttaaccaacacttttaaaatttcacctttgtctttttac
caggttaatccgctgcaaactgaaaatttataccgaattgcagctgaatacggtaattta
aaatctacagatactgtgatggatgcatattcgggaattggaaccgtcggaataagtttg
gcggatcgggttaaacaggtgatcggggttgaatcagttcagcaagctgttgaagatgca
ttgaataacgctcaactaaaccactatgacaacgttaaatatgtctgtggtaaggctgag
gaggtgattgatcaatggatatcagaaggcttgaaagtaaacaaaatttttgtggatccg
cctcgtaaaggtctagcaaagaattttattgaacaaagtgttaaaatgcagccagaaatc
attgtttatgtaagctgtaatcctgcgacccttggacgagatcttgcgatttataaggaa
ttagggtatgcgattaaaaaaattcagcccgttgatttatttcctcaaacaacccacgtt
gaatcggttactatgcttgaaaagaatcgaactttttaa
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