KEGG   Xylocopilactobacillus apicola: XA3_09070
Entry
XA3_09070         CDS       T09717                                 
Name
(GenBank) hypothetical protein
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
xap  Xylocopilactobacillus apicola
Pathway
xap03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:xap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    XA3_09070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xap03021]
    XA3_09070
   03400 DNA repair and recombination proteins [BR:xap03400]
    XA3_09070
Transcription machinery [BR:xap03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     XA3_09070
DNA repair and recombination proteins [BR:xap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      XA3_09070
SSDB
Motif
Pfam: HARE-HTH Glypican DUF4225
Other DBs
NCBI-ProteinID: BDR58466
UniProt: A0AAU9D7V2
LinkDB
Position
915668..916189
AA seq 173 aa
MELTVFEKQNKSELSMIEVAYAILKNNEQEMEFKNLYREVGKYLGKKKKELDNAIVDFYT
DLNVDGSFISLGNDLWGLREWYPFESVDEETNHNEDLKEMSDKNLSNYDEDDDVIDYADE
DPDAVPITDQFPKSSLSGDDFLEDEENQVEENPQSADEALSSFEDDDSNDSDF
NT seq 522 nt   +upstreamnt  +downstreamnt
ttggaattaactgtttttgaaaaacaaaataaatcagaattatcaatgatcgaggttgct
tatgcgattttgaaaaataatgaacaggaaatggagtttaaaaatctctatcgagaagtt
ggaaagtatctcgggaaaaagaaaaaagagctggataatgctattgttgatttttatacc
gatttgaatgttgatgggagtttcatttctttgggaaatgatttgtggggcttacgtgaa
tggtatccatttgaatctgttgacgaagagaccaatcataacgaagatttgaaagaaatg
tcagataagaatttatctaactatgatgaagatgacgatgttattgattatgctgatgaa
gatcctgatgcggtcccaattactgatcaattcccaaaatcatctttaagtggggatgat
tttctggaagatgaagaaaaccaagttgaagaaaatcctcagagtgctgatgaggccctt
tcgtcatttgaagacgatgatagcaatgatagtgacttttag

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