Xylocopilactobacillus apicola: XA3_10850
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Entry
XA3_10850 CDS
T09717
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xap
Xylocopilactobacillus apicola
Brite
KEGG Orthology (KO) [BR:
xap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xap03032
]
XA3_10850 (topA)
03400 DNA repair and recombination proteins [BR:
xap03400
]
XA3_10850 (topA)
Enzymes [BR:
xap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XA3_10850 (topA)
DNA replication proteins [BR:
xap03032
]
Prokaryotic type
DNA Topoisomerases
XA3_10850 (topA)
DNA repair and recombination proteins [BR:
xap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XA3_10850 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BDR58644
UniProt:
A0AAU9D4E3
LinkDB
All DBs
Position
complement(1100644..1102746)
Genome browser
AA seq
700 aa
AA seq
DB search
MVNSTKTKKGTTKKNLVIVESPTKAQTIERYLGRNYRVVASKGHIRDLPKSKMGVDLEHN
FKPEYISIRGKGPVIKDLKKEAAKAKQVYLASDPDREGEAIAWHVSHILGLKDTDKNRVV
FNEITKDTVKEAFKSPRAIDMNLVDAQQARRVLDRVVGYSISPILWHKVKKGLSAGRVQS
VALKLIIDRQKEIDNFIPEEYWSIEANFKKGAKTFIGDFYGIGGKKKKLSSDKDVKEVIT
KIDKKKKFDVSEVKKRQTKKNPYPAFTTSTLQQTANRKLNYHTKKTMMLAQQLYEGVNLG
GKTGHAGLITYMRTDSVRVSPVAVSEAHQFITDQYGKEYVGSRVAKNSKKEKVQDAHEAI
RPSSVARTPESLKSILSRDQLRLYTLIWNRFVASQMASAVYDTMNTTVEQNDVQFQVKGS
KLIFPGFTKVYKDNETKSEGKLPDLKEGDQVDLSKLSPAQHFTQPPAKYTEASLVKALEE
NGVGRPSTFSPIIDTLQKRYYVKLTAKRFEPTDLGKIVNNIIEEFFPEIVDINFTANIET
NLDNVEKGISDWVSVVDKFYQHFEPEVDNADQKIEKVEFKLELAGENCPECGAPLVYKMG
RYGKFIACSRFPDCRYTKAVVKEIGMVCPVCKEGQVIEKHTKRNRLFYGCSRYPNCEFMS
WDKPVPRNCPNCQHYLVEKKVKNTLQVVCPNGDYAEELQK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggtaaattcgacaaaaacaaaaaaaggaacaacaaaaaagaatttagtgattgtagag
tctcccactaaagcacaaacgattgaaagatatttaggtcgtaactatcgagttgtagcc
tctaaaggacacattcgtgatttgccaaaaagcaaaatgggtgttgatcttgaacataat
ttcaaaccagaatacatttcaattcgtggtaaaggtccggtaattaaggatcttaaaaaa
gaagcagcaaaagcaaagcaagtttatttggcctctgatccggatcgagagggcgaggca
attgcttggcacgtcagtcatattcttggactaaaagatactgacaaaaatcgagttgtt
tttaacgaaataacgaaggataccgtcaaagaagcatttaaaagtccacgcgccattgac
atgaatctcgtcgacgctcaacaagctcgtcgagtccttgatcgagtagttggatattca
atcagtccaattctttggcataaagttaaaaaaggattgtcagctggtagagttcagtct
gtagctttaaaattaattattgatcgacaaaaagaaattgataattttattcccgaagaa
tactggagtattgaagctaatttcaaaaaaggagccaagacttttatcggtgatttttat
ggaattgggggaaaaaagaagaaattaagcagtgataaagacgttaaagaagttatcact
aaaattgataaaaagaaaaaatttgacgtaagtgaagtcaagaaaagacagacaaagaaa
aatccttatccagctttcaccacttcaacattgcagcaaacggcaaatcgcaaacttaat
tatcacaccaaaaaaacaatgatgttggctcaacaactttatgaaggtgttaatttaggt
ggtaaaacagggcatgccggtcttattacgtatatgaggacggactcagttcgagtatct
ccagtcgcagtaagtgaggctcatcagtttattacagatcaatatggcaaagaatacgtt
ggatcacgtgttgctaagaatagtaaaaaagaaaaggttcaggatgcccatgaagcaatc
cgtcccagttcagtcgctaggacccctgaatcacttaagagcatcttatctcgcgaccaa
ttacgtttatacacgttaatttggaatcgttttgttgccagccaaatggctagtgcagtt
tacgacacaatgaatactactgtcgaacaaaatgatgtgcaatttcaggttaagggttcc
aaactaatttttcctggatttacaaaagtttataaagacaatgaaactaaatcagaagga
aaattgcctgatttaaaagaaggcgatcaagttgatctcagtaaattatcccccgcgcaa
cacttcactcagcctcccgctaaatacaccgaagctagtttagttaaagcattggaagag
aacggtgttggacgtccttcaacattttcgccaattattgatactttacaaaaacgatac
tatgtaaaattaactgcaaaacgttttgaacccactgatttaggtaaaattgttaacaat
attattgaggaatttttccctgaaattgtcgatataaattttacggcaaacattgaaaca
aatcttgataacgttgaaaaggggattagcgactgggtctcggtggttgataaattttat
caacattttgaacctgaagttgataatgccgatcaaaaaattgaaaaagttgaatttaaa
cttgaacttgcaggtgaaaattgtccagagtgtggggcaccattagtttacaaaatgggg
cgttatgggaaatttattgcttgtagtcgttttccagattgtcgttatacaaaagctgta
gtcaaagaaattgggatggtttgtccagtctgtaaagaaggtcaagtcatcgaaaaacac
actaaacgtaatcgacttttttatggttgttcacgctatccaaattgtgaatttatgtcg
tgggataaaccagttcctagaaattgtccgaattgccaacactatttagttgagaaaaaa
gtcaaaaatacccttcaggtggtttgcccgaacggtgattatgcagaggagctacaaaaa
taa
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