Xylocopilactobacillus apicola: XA3_17110
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Entry
XA3_17110 CDS
T09717
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xap
Xylocopilactobacillus apicola
Pathway
xap03030
DNA replication
xap03430
Mismatch repair
xap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XA3_17110 (holA)
03430 Mismatch repair
XA3_17110 (holA)
03440 Homologous recombination
XA3_17110 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xap03032
]
XA3_17110 (holA)
03400 DNA repair and recombination proteins [BR:
xap03400
]
XA3_17110 (holA)
Enzymes [BR:
xap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XA3_17110 (holA)
DNA replication proteins [BR:
xap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XA3_17110 (holA)
DNA repair and recombination proteins [BR:
xap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XA3_17110 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BDR59270
UniProt:
A0AAU9DA63
LinkDB
All DBs
Position
complement(1792705..1793712)
Genome browser
AA seq
335 aa
AA seq
DB search
MDLNSYIKEIKKVPAVIYLATGDETALFNDLRRKTKQVANLQQASFTVLDLAEDSAENFL
VELDNSSLFASKRYLYVEHFFSAFKKQFNAKQAKFLESRLKGSLAGVTLIFSGQGETIDR
RIGINKLITRNASQVDLSKLKPNEVRAKLVQYFKRNPEVKLERPVIEEILTRTNFDYTAL
RAEIPKLELFLTTTTELTVKDVKELISANPDDNVFGLIGALSSKSLTTIMPLYRELLDFY
GQPYVLNGALISNFQLLLQVKILSDAAYDQGLIQKKLGIHPYRIKLALQNSQRFSMRQLM
RLNHLLLEMDQKIKTSTVNYDELFSDLILELKIGR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaatagttacataaaagaaatcaaaaaagtccccgccgttatttatttagcg
acgggggatgagacagctttatttaatgatctgcgccggaaaacgaagcaagttgccaat
ttgcagcaagcttcgtttacggttttggatttagccgaggattcggccgagaattttcta
gttgagctcgacaactcaagcctttttgcgagcaaaaggtatctttatgtagagcacttt
ttctccgcttttaaaaagcagtttaacgcaaagcaagctaagtttcttgaaagcaggtta
aagggcagcttggcaggagtcacgctgattttcagcgggcaaggagaaacaatcgatcgg
cgtattgggatcaacaagttaatcacgcgtaatgcttcccaagtggatctgagcaagtta
aagcctaatgaggttcgggccaagttagtccaatattttaagcgaaatcctgaggtaaag
cttgaaaggccagtcattgaagaaattttgacgcgcaccaattttgattatacagcttta
agagctgaaatcccgaagcttgagctgtttttgacgacgacaaccgaattgacagttaaa
gacgtcaaagagctgatcagtgctaacccggatgataatgtttttggtttaattggcgct
ttgagcagcaaaagcttgacgacaattatgccgctttaccgggaactgctagatttttac
ggtcagccgtacgttcttaatggggctttaatcagtaattttcaactgctgctccaagtc
aaaattttaagcgacgccgcttacgatcaaggcttgattcaaaagaagctcgggattcat
ccttaccggattaaacttgccttgcaaaattcacaacgcttttcgatgcgtcagttaatg
aggctgaatcatcttttacttgaaatggaccagaaaattaaaactagcacggtcaattat
gacgagttatttagtgatttaattttggagcttaaaattggtcgctga
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