Xylocopilactobacillus apicola: XA3_18060
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Entry
XA3_18060 CDS
T09717
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
xap
Xylocopilactobacillus apicola
Pathway
xap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XA3_18060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xap03400
]
XA3_18060
DNA repair and recombination proteins [BR:
xap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XA3_18060
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XA3_18060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
UvrA_DNA-bind
AAA_21
AAA_29
AAA_15
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_23
AAA_22
AAA_25
ATPase
DUF463
DUF4350
cobW
nSTAND3
Anti-TRAP
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BDR59365
UniProt:
A0AAU9DCS7
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Position
1881060..1883573
Genome browser
AA seq
837 aa
AA seq
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MKIDHIEVRGGKVNNLKNIDLDIPLNQFVAISGLSGSGKSSLAMGILYAEGSRRYLEALS
TYTRRRIGQNKRTNVQTVKHIPAALALRQRPTIPNERSTVGSLTEVFNLVRLIFSRLGSV
VCPNGHRLDPTIKIAQAMDYTGERMGVITCPTCAVKFKAKSAEDYAFNAAGACSECHGLG
VTRTLDESRLIADDNLTIKEGAVASWHLPGRNFMPTVASYLGVRIDVPYKDLSAKEKEIV
LHGERQHVAIEIPTGKGRIFHMDHALYENAYNAVYDSLKTRTNERSIAQINKFFHFSTCP
VCHGSRLNPELLTTLVAGLNIAEVAELELGQLPAWEEKTKNSLPANMKTLAETLFADFDD
NLRPLIELGLDYLNLNRSGNSLSTGELQRIQLARTLRTETTGVLYVLDEPSIGLHPANIE
GLLHVLRSLVAQGNSLVVVDHEVDLIAASDWIIEIGPGSGDAGGQVIASGTPKYLPKNPL
SKIGPFISGKADILINKKPAENITSARTQIEINDHFNLHNLKVSIPEQQITAVTGFSGAG
KTTLILDSLVPSIKSPHNLPAHVDKLQTNLKNVVSVDASPVGKNSRSTVATYTKIMDNLR
KLFADLPDSKKRNYTISSFSYNNKEGACPHCGGVGTISLDIQFLPDLEEVCPYCQGTRFN
PEIQEIKWNNYSIVDLLNLSVTEALPVLAEIPPIEQVLKQLKAVGLEYLHLGETTPSLSG
GEAQRLKIVKHLNKKQQNTLFVFDEPTIGLHPLDVQVLLKIIERLCDNGATIIVITHDLD
LMINADELLDLGPRGGDRGGKIVAQGNPLDLIKSPQSLTTRYLAAHANKFKLFSYKR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattgatcacattgaagtacgaggcggcaaagtcaataatttaaaaaacattgat
ctggatattcctctcaatcaatttgtcgctatttccggtctttctggctcaggcaaaagt
tcacttgcgatgggaattctctacgctgaaggatcacgtcgatatcttgaagcactatcg
acttatacgcggcgaagaatcggtcaaaacaagcgaacaaatgtccaaacagtcaaacac
attcctgccgccctggctttacgtcaacgaccaacaattccaaatgaacgttcgacagtt
ggttcactaacggaggtgtttaatttagtgcggctaatattctcacggttgggctctgtt
gtctgtcctaacggacatcgacttgatcccacgatcaagattgctcaagcaatggattat
accggtgaacgcatgggagtaatcacttgtccaacttgcgctgtcaagttcaaagcaaaa
agcgcagaagattacgcatttaacgctgcaggcgcatgttctgaatgccacggactcggg
gtcactcgcacattagacgaaagtcgcttaattgctgatgataatcttacaattaaagaa
ggagcggtcgcatcttggcatctacctggtcgaaatttcatgccaacggttgctagttac
cttggcgtccgaattgacgtgccatataaagaccttagcgctaaagaaaaagagatcgtt
ttacacggagaaagacagcatgttgcaattgaaattccaactggcaaaggccggattttt
catatggatcatgctctttatgagaatgcttataatgcagtttacgactcgctaaaaacg
agaaccaatgaacgttcaattgcgcaaatcaataaatttttccatttttcaacctgtcca
gtttgtcacggttcaaggctaaatcccgaacttctaacgactctcgtcgcaggtcttaat
attgccgaagttgccgaactagaacttgggcaacttccagcttgggaagaaaaaactaaa
aactctcttcctgctaatatgaaaacactggctgaaacactttttgccgatttcgacgac
aacctgcgcccgctaattgaattgggacttgattaccttaatttaaaccgcagcggcaac
agtctttcaaccggtgaattacagcgcatccagttggctcgaactttaagaactgaaaca
acgggcgtgctttacgttttagacgagccttcaattggattacatccggcaaatatcgaa
ggtttgcttcacgttctacgctcccttgtcgcccaaggcaactctctggttgtcgttgat
cacgaagtagatctaatcgcggcttctgattggattattgaaattggtcctggctcggga
gatgcaggggggcaagtcattgcatccggcactccgaaatatttacctaagaatcctcta
tctaagattggtccctttatttcaggtaaagcagatattctaataaacaaaaagccagct
gaaaatatcacgtcagctagaactcaaattgagattaatgatcattttaatctccacaat
ttgaaagtttccatccctgaacaacaaattacagctgttacaggattttcgggtgccggg
aaaactactctgattcttgatagtcttgtaccatcgattaaatctccgcataatcttccg
gcacatgttgataagcttcaaaccaatctaaaaaacgtcgtaagcgttgatgcaagtcct
gtgggcaaaaattctcgttcaaccgttgcaacatataccaaaataatggacaacttacgc
aaactttttgccgacttaccggattcaaaaaagcgcaactacacaattagtagtttttcc
tacaataataaagaaggagcttgtcctcattgcggcggagttgggacgattagtttagat
atccaatttctgcccgacttagaggaagtgtgcccttattgtcagggaacacgctttaat
cccgagattcaagaaattaaatggaacaattattcaattgttgatcttttgaatttatca
gttactgaagccctccccgttttggccgaaattccgccaattgaacaagttctaaaacaa
ttaaaggctgtcggccttgaatatcttcatctcggtgaaacgactcctagtttatctggt
ggcgaagcacaaagacttaaaatagtcaaacatctcaataagaaacagcaaaatacgctt
ttcgtttttgacgaaccgactattggacttcacccactagatgttcaagttcttcttaaa
attatcgagcgtctttgcgataatggcgcaacaataatcgttattacccatgaccttgac
ttgatgattaatgcagacgagttgcttgacctaggtccgcgcgggggtgacagaggtggc
aaaattgtggcacagggtaatccgctagatttgattaagagccctcaaagtctaaccact
cgttacttagcagctcatgctaataaattcaaacttttctcttataaaagataa
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