Xanthomonas arboricola: XB05_00380
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Entry
XB05_00380 CDS
T06096
Name
(GenBank) propanediol utilization protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xar
Xanthomonas arboricola
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xar03000
]
XB05_00380
Transcription factors [BR:
xar03000
]
Prokaryotic type
Helix-turn-helix
Other families
XB05_00380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_23
AAA
HTH_Tnp_ISL3
AAA_2
HTH_17
nSTAND3
HTH_28
HTH_Tnp_1_2
AAA_7
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AKC77373
LinkDB
All DBs
Position
complement(65640..67241)
Genome browser
AA seq
533 aa
AA seq
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MRSPRFTEPMEPSPPVIWTVSVSRLTGLLADVIPEFDQRARIEQVNLGFAEAVEVIGQRL
RRERCDVLVAGGSNAAYLRSRLALPLAPIQATGFDLMEALARARRIAPRIGVVTHATDVP
SFRAFQDSFDLDIEHRRFVTAEDARDCIADLRASGIQVIVGTGMAIDFAEQAGLPGVLLY
SADSVRLALEHAIALGTAPGNERGGSRTGTRRVRRTDALLGEDAAIAHVRELVQLYAPHP
GTVLISGETGTGKELVARQLHAGSRRRGRFVAINCGAISESLLEAELFGYSDGAFTGARR
GGHVGLIEAAQDGTLFLDEIGELPMPLQTRLLRVLEEREVLRVGATLPVAVDVRVIAASL
QPLQALVEQGRFRRDLFYRLAALRIALPPLRHRPHEIALLLAHYFQQLGALPSPLSPAAL
QRLQQHTWPGNVRELRNLVERLCIHWKAQPHDSLDLDQMQRWAPELFDMRIDGSVAAPEH
SDLATSRMQLTAAAVRAALDRANGNRALAAQALGVSRTTLWRWMQAHASASPA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccccaggtttaccgagccgatggagccctctccaccggtcatctggaccgtc
agcgtctctcgcctgaccggcctgctggccgacgtcatccccgagttcgaccagcgcgcg
cgcatcgagcaggtcaacctcggttttgccgaggcggtggaggtcatcggccagcgcctg
cgccgcgagcgctgcgacgtactggtcgccggcggctccaatgccgcctatctgcgtagc
cggctcgcactgccactggcgccgatccaggccaccgggttcgatctgatggaagcgctg
gcgcgcgcacgccgcatcgcaccgcgcatcggcgtggtcacccatgccaccgacgtgccc
tcgttccgcgccttccaggacagcttcgacctcgacatcgagcaccgccgcttcgtcacc
gccgaagacgcgcgcgactgcattgccgacctgcgcgccagcggcatccaggtcatcgtc
ggcaccggcatggcgatcgatttcgccgagcaggccggtctgcccggcgtgctgctgtac
tcggcagattcggtccgcctggcgctcgaacacgccatcgcgctgggtaccgcacccggc
aacgagcgcggcggcagccgcaccggcacgcgccgggtgcggcgcaccgacgcattactt
ggcgaagacgccgcaatcgcgcatgtgcgcgagctggtgcagctgtacgccccccatccg
ggcaccgtattgatcagcggcgagaccggcaccggcaaggaactggtcgcgcgccagttg
catgccggcagccgacggcgcggccgtttcgtcgccatcaactgcggcgccatcagcgaa
tcgctgctggaagcggaattgttcggctacagcgacggcgcctttaccggcgcacgccgc
ggcggccatgtcggcctgatcgaagccgcgcaggacggcacgctgtttctcgacgagatc
ggcgaactgcccatgccgctgcagacacgcctgttgcgcgtgctggaggagcgcgaagtg
ctgcgtgtcggcgctacgttgccggtcgccgtcgacgtacgcgtcatcgccgccagcctg
cagccattgcaggccctggtcgaacaggggcgcttccgccgcgaccttttttatcgcctg
gcagcgttacgcatcgccctgccgccgctacgtcatcgcccccacgagatcgccttgttg
ctggcacattacttccagcaactcggcgcgctgccgtcgccattgtctccagcagcgctg
cagcggctgcaacagcacacctggccgggcaacgtgcgcgaactacgcaacctggtcgaa
cgcctgtgcatccactggaaggcccaaccgcacgacagcctggacctggatcaaatgcaa
cgctgggcacccgagctgttcgacatgcggattgacggcagcgtggcggcccccgagcac
agcgatcttgcaacctcgcgcatgcaactcactgccgcagcggtccgcgccgcgctcgat
cgcgcaaacggcaatcgcgccctcgccgcccaggcgctcggcgtctcgcgcacgacgttg
tggcgctggatgcaggcgcacgcgtcggcatcgcctgcttga
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