Xanthomonas arboricola: XB05_01625
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Entry
XB05_01625 CDS
T06096
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
xar
Xanthomonas arboricola
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xar03400
]
XB05_01625
Enzymes [BR:
xar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
XB05_01625
DNA repair and recombination proteins [BR:
xar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
XB05_01625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AKC77585
LinkDB
All DBs
Position
394681..396258
Genome browser
AA seq
525 aa
AA seq
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MSNSDATAGERHPQPAAHTLRLVLGDQLNPQHSWFDATDAGVVYVLMEVREETDYVLHHA
QKILAIFAAMRAFAARLRQAGHRVRYVAIDNPSNRQSIPANLDALIAHYRASQLEYQAPD
EWRLDEALQQWCARQPFATRMVDSEHFLTERDEVAGCFRAGGQWRMEVFYRKMRRRHRIL
LDAAGEPEGGRWNFDYDNRAPWPGDPPAPQEWRAAHDHRALWSVIEAAGVHSFGAPNADA
LPWPLDRDEALQHLDAFITHALPHFGRYEDAMSTRSPRLFHSLLSFALNVKLLHPREVIA
RAEAALHDRHAPLASVEGFIRQILGWREYVRGVYWSQMPGYALPNRLDQHAPLPHWFWDG
QIGMRCLADAIGNSLTNAHAHHIQRLMVIGNFALLAGLDPQALHRWYLGIYIDAFEWVEL
PNTVGMSQFADGGLLGSKPYISGAAYIDRMSDYCGGCRYQRKVRVGPQACPYNALYWDFL
ARQRTLLGANERLALPYRQLDAMAPEVLEQVQAQAAHWRANLEVL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattctgacgcgaccgcaggcgagcgtcacccgcagccagccgcacatacgctg
cgcctggtcctgggcgatcagctcaacccgcaacacagctggttcgatgccaccgatgcg
ggcgtggtctacgtgctgatggaagtgcgcgaggaaaccgactacgtgctgcaccacgcg
cagaagatcctggcgatcttcgcggcgatgcgcgcgtttgccgcgcgcctgcggcaggcc
ggtcatcgggtgcgttacgtggccatcgacaaccccagcaatcggcaatcgattcccgcc
aatctggacgcgctgatcgcgcattaccgcgccagccagttggagtatcaggcgccggac
gaatggcggctggacgaagcattgcagcagtggtgcgcgcggcagccgttcgccacgcgc
atggtcgacagcgaacatttcctgaccgagcgcgatgaggtggccgggtgttttcgcgct
ggcggccaatggcgcatggaagtgttctatcgaaagatgcgccgccggcaccggatcctg
ctcgatgccgcaggcgagccggaaggcgggcgctggaatttcgattacgacaaccgtgcg
ccatggccaggcgatccgcccgcgccgcaggagtggcgcgccgcgcacgatcaccgcgcg
ctgtggagtgtcatcgaggcagccggcgtgcacagcttcggtgcgccgaatgccgatgcg
ctgccgtggccgctggatcgcgacgaagccttgcagcacctggatgccttcatcacgcat
gcgttgccgcacttcggtcgctacgaggatgcgatgagcacgcgcagcccgcgtctgttc
cattcgctgctgtcgttcgcgctcaacgtcaagctgctgcatccgcgcgaggtgattgcg
cgcgcggaggcggccctgcatgacaggcatgcgccgctggcatcggtggaaggcttcatc
cgtcagatcctgggctggcgcgaatacgtgcgcggcgtgtattggtcgcagatgcccggt
tacgcgctgcccaatcggctcgaccagcatgcgccgctgccgcactggttctgggacggg
cagatcggcatgcgctgcctggccgatgcgatcggcaattcgctgaccaacgcgcatgcg
caccacatccagcggctgatggtgatcggcaatttcgcgctgctggcggggctggacccg
caggccctgcatcgctggtacctgggcatctacatcgatgcgttcgagtgggtggagctg
cccaatacggtcggcatgagccagttcgccgacggcggcctgctcggcagcaagccgtac
atcagcggtgcggcctacatcgaccgcatgagcgattactgcggtggctgccgctatcag
cgcaaggtgcgggtgggcccgcaggcctgtccgtacaacgcgctgtactgggatttcctg
gcgcggcagcgcacgctgctgggcgccaacgagcgcctggcgctgccgtaccggcagctc
gacgccatggcaccggaggtgctggagcaggtgcaggcgcaggccgcgcattggcgggca
aatctggaggtgctttga
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