Xanthomonas arboricola: XB05_02160
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Entry
XB05_02160 CDS
T06096
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xar
Xanthomonas arboricola
Pathway
xar00300
Lysine biosynthesis
xar01100
Metabolic pathways
xar01120
Microbial metabolism in diverse environments
xar01230
Biosynthesis of amino acids
Module
xar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XB05_02160
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xar01002
]
XB05_02160
Enzymes [BR:
xar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
XB05_02160
Peptidases and inhibitors [BR:
xar01002
]
Metallo peptidases
Family M20
XB05_02160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AKC77686
LinkDB
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Position
511775..512908
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AA seq
377 aa
AA seq
DB search
MTSDVLQLTCELIARASVTPDDAGCQVLLAQRLEAAGFACEHLRLGQVDNLWATHGSGAP
VLVLLGHTDVVPPGPREAWTSDPFDPQIRDGLLYGRGTADMKGSVAAFAIAAEQFVAAHP
QHAGTLAVLLTSDEEGDAIDGVRRVAELFRARGQAIDWCITGEPSSTERLGDLLRVGRRG
SLSGTLTVKGVQGHVAYPHKARNPIHLAAPALAELVARQWDEGFESFPPTSLQVSNIHAG
TGANNVIPGELQVAFNLRYTPLWDAPRLEAEITALLDRHGLDYALRWHRSGEPFYTPEGR
LRSVAREVLGQFAGAPPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDEHVRVADL
EALPALYRTLIERLLVD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgacgtactgcaactgacctgcgagctgatcgcacgtgcctcggtcacaccg
gacgacgccggctgccaggtgctgcttgcgcaacgcctggaggctgccggattcgcttgc
gagcatctgcgcctgggccaggtcgacaatctgtgggccacccacggcagcggtgcgccg
gtgctggtgctgcttggccacaccgatgtggtgccgccgggtccgcgcgaggcctggacc
agcgatccgttcgatccgcagatccgcgatggtctgctgtacgggcgcggcacggccgac
atgaagggcagcgtggccgccttcgcgatcgctgccgaacagttcgtcgccgcccatccg
cagcatgccggcacgctggcggtgttgctgacctccgatgaagaaggcgatgccatcgac
ggcgtgcggcgcgtggccgagctgttccgtgcgcgcgggcaggcgatcgactggtgcatc
accggcgagccgtcgtccaccgaacggctgggcgacctgctgcgcgtgggccgccgcggc
agtctgtccggcacgctgacggtgaaaggcgtgcaggggcacgtggcgtatccgcataag
gcgcgcaatccgatccatctggccgcgccggccttggccgagctggtggcgcggcagtgg
gacgagggtttcgagagttttccgccgaccagcctgcaggtgtcgaacatccatgccggc
accggcgccaataacgtgattccgggcgagctgcaggtggccttcaatctgcgctacacc
ccgctgtgggatgcgccgcggctggaagcggaaatcaccgcattgctggatcgccacggg
ctggactatgcgctgcgctggcatcgcagcggcgagccgttctacaccccggaaggccgc
ctgcgcagcgtcgcacgcgaggtgctgggccagttcgccggcgcaccgccggaagaaagc
accggcggcggcacctccgatgcgcgcttcatcgcgccgctgggcgcgcaatgcatcgag
gtcggcccggtcaacgccagcatccaccaggtcgacgagcatgtgcgcgtggccgatctg
gaagcgctgccggcgttatatcgcacgctgatcgagcggcttctggtcgattga
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