Xanthomonas arboricola: XB05_03730
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Entry
XB05_03730 CDS
T06096
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
xar
Xanthomonas arboricola
Pathway
xar02024
Quorum sensing
xar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XB05_03730
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XB05_03730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xar03019
]
XB05_03730
03036 Chromosome and associated proteins [BR:
xar03036
]
XB05_03730
Messenger RNA biogenesis [BR:
xar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XB05_03730
Chromosome and associated proteins [BR:
xar03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
XB05_03730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AKC81226
LinkDB
All DBs
Position
880312..880590
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AA seq
92 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSNEGNQAEDDDVEQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaggacccattcctcaacgcgctgcggcgcgagcgggtg
ccggtttctgtgtatctggtcaacggcatcaagctgcagggcacgatcgagtcgttcgac
cagttcgtggtcctgctgcgcaataccgtgagtcagatggtctacaagcacgccatctcc
acggtcgtgccggcgcgcaatgtgcgcgtgggaccgggtggtgggtatgtgcaatccaat
gaaggcaaccaggcggaagatgacgacgtcgagcagtaa
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