Xanthomonas arboricola: XB05_05110
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Entry
XB05_05110 CDS
T06096
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xar
Xanthomonas arboricola
Pathway
xar00260
Glycine, serine and threonine metabolism
xar00460
Cyanoamino acid metabolism
xar00630
Glyoxylate and dicarboxylate metabolism
xar00670
One carbon pool by folate
xar00680
Methane metabolism
xar01100
Metabolic pathways
xar01110
Biosynthesis of secondary metabolites
xar01120
Microbial metabolism in diverse environments
xar01200
Carbon metabolism
xar01230
Biosynthesis of amino acids
xar01240
Biosynthesis of cofactors
xar04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XB05_05110 (glyA)
09102 Energy metabolism
00680 Methane metabolism
XB05_05110 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XB05_05110 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
XB05_05110 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XB05_05110 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
XB05_05110 (glyA)
Enzymes [BR:
xar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
XB05_05110 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AKC78186
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Position
complement(1218477..1219748)
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AA seq
423 aa
AA seq
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MYDTSLTLADFDPELAQAVQHEERRQDDHVELIASENYASPLVMAVQNSVFTNKYAEGYP
GKRYYSGCENVDVAECLAIERLKALFDCDWANVQPHAGAQANAAVFLALAKPGDTVMGMN
LAQGGHLTHGNPSNFSGRHYKIVPYGLDPDTGLIDYDEMERIALQTRPRMLIGGFSAYSR
HKDWARMRAIADKVGAIFWVDMAHVAGLVAAGEYPNPLPHAHVVTSTTHKTLRGPRGGII
LAKGQDEDFYKKLDSAVFPGVQGGPLMHVIAAKAVAFKEALRPEFKTYQRQVVTNARAMA
AVLQQRGYRVVSGGTDNHLMLIDLSAKPYTGKDADTALADAWITTNKNSVPNDPRSPFVT
SGIRIGTPAVTTRGFGVAECEQLAGWLCDVLDALEAGSAGLTTVRDRVREQVANLCRRHP
VYK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacacatccctgaccctggccgacttcgaccccgaactggcccaggccgtccag
cacgaagaacgccgccaggacgatcacgtcgaactgatcgcctccgagaactacgccagc
ccgctggtgatggccgtccagaactcggtgttcaccaacaagtacgccgagggctacccc
ggcaagcgctactacagcggttgcgagaacgtggacgtggccgagtgcctggccatcgaa
cggctcaaggcgctgttcgactgcgactgggccaacgtccagccccatgccggcgcccag
gccaacgcggcggtgttcctggcgctggccaagcccggcgacaccgtgatgggcatgaac
ctggcccagggcggccacctgacccacggcaacccgtccaacttctccggccggcactac
aagatcgtgccctacggcctggaccccgacacgggcctgatcgactacgacgagatggag
cgcatcgcgctgcaaacccggcccaggatgctgatcggcggtttctccgcctattcgcgg
cacaaggactgggcgcgcatgcgcgccatcgccgacaaggtgggcgccatcttctgggtg
gacatggcccatgtcgccggcctggtcgcggcgggcgaatacccgaacccgctgccccac
gcccatgtggtcaccagcaccacccacaagaccctgcgcggcccacgcggcggcatcatc
ctcgccaaggggcaggatgaagacttctacaagaaactcgattccgccgtgtttcccggc
gtccagggcggcccgctgatgcacgtcatcgccgccaaggccgtggccttcaaggaggcg
ctgcggcccgagttcaaaacctaccagcgccaggtggtgaccaacgcccgcgccatggcg
gcggtgctccagcagcgcggctatcgtgtcgtttccggcggcaccgacaaccacctgatg
ctgatcgacctgtccgccaagccgtacaccggcaaggatgcagacacggcactggccgac
gcctggatcacgacgaacaagaactcggtgcccaacgacccacgctcgcctttcgtgact
tcaggcattcgcatcggcacgccagccgtgaccacgcgcggcttcggcgtggccgaatgc
gaacaactggcggggtggctgtgcgacgtgctggatgcgctggaagccggcagcgccgga
ctgacgacagtacgtgatcgggtgcgggagcaggtggcgaatctgtgccgtcgccatcct
gtctacaaatag
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