Xanthomonas arboricola: XB05_05475
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Entry
XB05_05475 CDS
T06096
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
xar
Xanthomonas arboricola
Pathway
xar00071
Fatty acid degradation
xar00362
Benzoate degradation
xar00650
Butanoate metabolism
xar01100
Metabolic pathways
xar01120
Microbial metabolism in diverse environments
xar01200
Carbon metabolism
xar01212
Fatty acid metabolism
Module
xar_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XB05_05475
09103 Lipid metabolism
00071 Fatty acid degradation
XB05_05475
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XB05_05475
Enzymes [BR:
xar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XB05_05475
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
ApbA
DAO
Shikimate_DH
Pyr_redox_2
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AKC78250
LinkDB
All DBs
Position
complement(1301327..1303699)
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AA seq
790 aa
AA seq
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MSNPLLVRRAAVLGAGVMGAQIAAHLTNAGVDTVLFDLPAKEGPADGIVLKAIANLGKLS
PAPLASKALAEAITPANYESGLEQLRDCDLIIEAIAERMDWKQDLYKKIAPFVADHAVLA
SNTSGLGINKLSDVLPEQLRHRFCGVHFFNPPRYMHLAELIPAKGTDKAVLEGLESFLVT
TLGKGVVYAKDTPNFIGNRIGVFSILSTIHHTAEFGLGFDEVDALTGPLVGRPKSATYRT
SDVVGLDTMAHVIKTMGDTLPDDPWHQYFKSPKWLEALIGKGALGQKVGAGIFRKVGKDI
VVLDLEKQDYRTADRSAAPEVVEILKIKNPAEKFAKLRESQHPQAQFLWATFRDLFHYSA
YHLADIAETARDVDLAIRWGYGWSLGPFETWQAAGWKQVAQWIAEDISNGKSMSSAPLPN
WVFDGRDGVHAAEGSYSPARDAKLPRSALPVYKRQRFPDPLLGEQFSPGETVFENDGVRM
WHDGDDIAVVSFKTKMNTVSDHVLNGLQEVVGRAEKDFAGLVIWQQKEPFSAGADLAGAL
GLLQAGKVDAFEALVANFQATSQRIKYAQVPVISAVRGLALGGGCEFQMHSAKTVASLES
YIGLVEAGVGLLPAGGGLKEIAVRASQAAGPGGDVFAELKKTFETIAMAKVSNSAVNAKE
LGLLRATDKVVFNSFEALHIAKAEARALAEGGYRAPLPARRIQVAGDVGIATFKMLLVNM
LEGRFISDYDYEIATRIATVMCGGEVDRGALVDEEWLLKLERKHFVELAQQEKTQARIGH
MLKTGKPLRN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccgttgctagtccgtcgtgctgccgtgctcggtgccggcgtcatgggcgcg
cagatcgccgcgcacctcaccaatgccggtgtcgacaccgtgctgttcgacctgcctgcc
aaggaaggtcctgccgacggcatcgtgctcaaggccatcgccaacctcggcaagctcagc
cctgccccgctcgccagcaaggccctggccgaggcgatcacgccggccaactatgaaagc
ggcctggagcagctgcgcgattgcgacctgatcatcgaagcgatcgccgagcgcatggac
tggaagcaggacctgtacaagaagatcgccccgttcgtggccgatcacgccgtgctggcc
tccaatacctcgggcctgggcatcaacaagctctccgacgtgctgcccgagcagttgcgc
caccgcttctgcggcgtgcatttcttcaatccgccgcgctacatgcacctggccgaactg
attcccgccaagggcaccgacaaggccgtgctggaaggcctggagagcttcctggtcacc
acgctgggcaagggagtggtgtatgcgaaggacaccccgaacttcatcggcaaccgcatc
ggcgtgttctcgatcctgtccaccatccaccacaccgccgagttcgggctgggcttcgac
gaagtcgatgcgctgaccggcccgttggtcgggcgccccaagtcggcgacctatcgcacc
tcggacgtggtcggcctggacaccatggcgcacgtgatcaagaccatgggcgacaccctg
cccgacgatccgtggcaccagtacttcaagtcgcccaagtggctggaggcgctgatcggc
aagggcgcgctcggccagaaggtcggtgccggcatcttccgcaaggtcggcaaggacatc
gtggtgctggacctggagaagcaggattacagaaccgccgatcgcagcgcggcgccggaa
gtggtcgagatcctcaagatcaagaacccggccgagaagttcgccaaactgcgcgagagc
cagcacccgcaggcgcagttcctgtgggctaccttccgcgacctgttccactacagcgcc
tatcacctggccgatatcgccgagaccgcgcgcgacgtggatctggcgatccgctggggc
tacggctggtcgctcggcccgttcgagacctggcaggccgccggctggaagcaggtagcg
cagtggattgccgaagacatctccaacggcaagagcatgagcagcgcgccgttgccgaac
tgggtgttcgacggccgtgatggcgtgcatgcggccgaaggctcgtacagcccggcgcgc
gacgccaagctgccgcgctcggcactgccggtgtacaagcgccagcgcttccccgatccg
ctgctgggcgagcagttctcgccgggcgagacggtgttcgaaaacgacggcgtgcgcatg
tggcatgacggcgacgacatcgccgtggtcagcttcaagaccaagatgaacaccgtctcc
gatcacgtgctcaacggtctgcaggaggtcgtcggccgcgccgagaaggacttcgccggg
ctggtgatctggcagcagaaggagcccttctccgccggcgccgatctggccggcgcgctg
ggtctgctgcaggccggcaaggtcgatgcattcgaagcgctggtcgccaacttccaggcc
accagccagcgcatcaagtacgcgcaggtgccggtgatttcagcagtgcgcgggctggcg
ctgggcggcggctgcgagttccagatgcacagcgccaagaccgtggcctcgctggaaagc
tacatcggcctggtcgaagctggcgtcggcctgctgccggccggcggtggcctgaaggaa
atcgccgtgcgcgcctcgcaggctgcaggtccgggcggcgatgtgttcgccgagctgaag
aagaccttcgaaaccatcgcgatggccaaggtgtccaattcggcggtcaatgccaaggag
ctgggcctgctgcgcgccaccgacaaggtggtgttcaacagcttcgaggcgttgcacatc
gccaaggccgaagcgcgcgcactggccgagggcggctaccgcgccccgctgccggcacgt
cgcatccaggtcgccggcgacgtcggcatcgccaccttcaagatgctgctggtcaacatg
ctggaaggccgcttcatcagcgactacgactatgaaatcgccacccgcatcgccacggtg
atgtgcggcggcgaagtcgatcgcggcgcactggtcgacgaggaatggctgctcaagctg
gagcgcaagcacttcgtcgaactggcccagcaggaaaagacccaggcgcggattgggcac
atgctcaagacgggtaagccactcaggaactga
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