Xanthomonas arboricola: XB05_08005
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Entry
XB05_08005 CDS
T06096
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xar
Xanthomonas arboricola
Pathway
xar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XB05_08005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xar03400
]
XB05_08005
DNA repair and recombination proteins [BR:
xar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XB05_08005
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XB05_08005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
UB2H
Motif
Other DBs
NCBI-ProteinID:
AKC78674
LinkDB
All DBs
Position
complement(1895015..1897036)
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFQLVSPYSPAGDQPAAIDKLVASFEAGLAKQTLLGVTGSGKTYTIANVIQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKDELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLID
PVVEIRPVGTQVDDLMSEIHERIKLGDRVLVTTLTKRMSENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVARPISDIMEGA
REDAAEKKAGKGRSKSRQVAEEMPDYRAMGPAQIAGKLKSLEQQMYQHAKDLEFEAAAQI
RDQIQKLKAASLA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttttcagctcgtatctccgtactccccagccggcgatcagcctgccgcc
atcgacaagctggtggccagcttcgaggccggcctggccaagcagaccttgttgggtgtg
accggctccggcaagacctacaccattgccaacgtgattcagcaggtgcagaagccaacc
ctggtgatggcgccgaacaagacgctggcggcgcagctgtacggtgaattcaagtcgttt
tttccgcacaacgcggtggagtacttcgtcagctactacgattactaccagcccgaggcc
tatgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgagcacattgag
cagatgcgtctgtcggcgaccaagaccttgctgtcgcgtcgtgattcgctggtggtggcc
acggtgtcggcgatctacggcctgggcgcgccggaagactatctgtcactgcgcttgatc
ctgtcggtgggcgagcacatcgaccagcggcagttgatccgccatctcaccgatctgcag
tacacccgcaacgaattcgagctgacccgtggcgcgttccgcgtgcgtggcgaagtgctg
gatgtgttcccggcagaatccgacaccgaggcgttgcgtatcgagttgttcgatggcgac
atcgagcagctgaccctgttcgatccgttgaccggtgaaacgctgcgcaagctgcagcgc
tacaccgtgtatcccaagacccattacgcgaccacgcgcgagcgcacgctgagtgcggtg
gatacgatcaaggacgagttgaaggagcggttggagcagctgtattcgcagaacaagctg
gtcgaagcgcagcggctggcgcagcgcacccagttcgatctggaaatgatggccgaagtc
ggcttctgcaacggtatcgagaactactcgcggcatctcaccggcaaggcgcctggcgag
ccgccgccgacgttgttcgactacctgccgccggacgcgttgctggtcatcgacgagtcg
cacgtgaccattccgcagatcggcgcgatgtacaagggcgaccgttcgcgcaaggagacg
ctggtggagttcggtttccgtctgccgtcggcactggacaaccggccgctgcgtttcgag
gaatgggaggcgcgctcgccgcgcagcatctatgtgtcggccaccccaggcccttacgag
ctgcgcgagtccgcgggcgagatcaccgagctggtggtgcgcccgaccggcctgatcgat
ccggtggtcgagattcgcccggtcggaacgcaggtggacgacctgatgtccgaaatccac
gagcgcatcaagctcggtgatcgcgtgttggtgacgacgctgaccaagcgcatgtccgag
aacctcaccgagtacctcggcgagcacggcattcgcgtgcgctatctgcattcggatatc
gacacggtggagcgcgtggagatcatccgcgacctgcgcctgggcaagttcgatgtgctg
gtcggcatcaatctcctgcgagaaggcctggatatgccggaagtgtcgctggtggcgatc
ttggatgcggacaaggaaggcttcctgcgctcgaccggctcgctgattcagacaatcggt
cgcgccgcgcgcaacctgcgcggcaaggccattctgtatgccgacaagatgacgcgttcg
atgcaggcggcgatcgacgagaccgaccgccgccgcgagaagcaggtcgagtacaacctg
gagcatggcatcacccccaagtcggtggcgcgtccgatctccgacatcatggaaggtgcg
cgcgaggatgccgccgagaagaaggccggcaagggacgttcgaagtcgcgccaggtggcg
gaggaaatgcccgattaccgcgcgatggggcctgctcagatcgccggcaagctcaagagc
ctggagcagcagatgtaccagcatgccaaggacctggagttcgaggcggctgcgcagatc
cgcgaccagatccagaaactgaaagctgccagcctggcgtag
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integrated database retrieval system
