Xanthomonas arboricola: XB05_08370
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Entry
XB05_08370 CDS
T06096
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xar
Xanthomonas arboricola
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xar03009
]
XB05_08370 (rimO)
Enzymes [BR:
xar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
XB05_08370 (rimO)
Ribosome biogenesis [BR:
xar03009
]
Prokaryotic type
ribosomal protein modification factors
XB05_08370 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
TRAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AKC78736
LinkDB
All DBs
Position
complement(1974774..1976144)
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AA seq
456 aa
AA seq
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MSESRSVGFISLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTES
LDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHDP
FVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLASRPVDEVLREAERLVRG
GVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTRLHYVYPYPHV
DDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWKAMCPEITVRSTF
IVGFPGETDAEFESMLDFLDQAQLDRVGAFAYSPVEGASANALPDPVPEELKQERLARFM
AKQAEISAARLEAKIGSVQQCLVDLIEDDIAVARSRADAPEIDGLVHIQNGGERGLKVGD
LVDVEITDSDEHDLFGDALPANVAIQQGRPLNLQMV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaaagcaggagtgtagggtttatatcgttgggctgcccgaaggcgctcgtcgac
tccgaacgcatcctcacccaattgcgcgtggagggctacgacatcgtgcccagttacgac
gctgccgatgtggtggtggtcaacacctgcggcttcatcgactcggcggtgaccgagtcg
ctggatgctatcggcgaggcgatgaacgccaacggcaaggtgatcgtcaccggctgtctg
ggcaagcgcccggaacagatccgcgaggcctacccgcaggtgctggcggtgtccggcccg
caggactaccagagcgtgatggaggcggtgcacgccgcattgccgccgcgtcacgacccg
ttcgtggatctggtgcccgactacggcatcaagctgaccccgcgccattacgcgtatctg
aagatctccgaaggctgcaaccaccgttgcagcttctgcatcattccgtcgatgcgcggc
gatctggcctcgcgtccggtcgatgaggtgctgcgcgaagccgaacgcctggtgcgtggc
ggggtcaaggaattgctggtggtctcgcaggacacctcggcctacggcgtggacctgaaa
tatgccgagcgcccgtggcgcgatcgcatgtaccagacccgcatgaaggcgctgtgcgaa
ggcctgtcggagctgggcgtgtggacgcggctgcactacgtgtatccgtaccctcacgtg
gacgatgtgattccgctgatggccgaaggcaagctgctgccgtacctggacatcccgttc
cagcacgccagcccgcgcatcctcaagctgatgaagcggcccggtgcggtggaaaagacc
ctcgagcgcgtgcagcgctggaaggcgatgtgcccggagatcacggtgcgctccaccttc
atcgtcggcttccccggcgagaccgatgccgaattcgaatccatgctcgacttcctggat
caggcccagctcgatcgcgtcggcgcgtttgcgtattcgccggtggagggtgccagcgcc
aacgcgttgccggatccggtgccggaagagctcaagcaggagcgtctggcgcgcttcatg
gccaagcaggcggagatttccgctgcgcggctggaggccaagattggcagcgtgcagcaa
tgcctggtcgacctgatcgaggacgatatcgcggtggcgcgctcacgcgcggacgcaccg
gaaatcgacggcctggtgcatatccagaacggcggcgagcgcggcttgaaggtcggcgac
ctggtcgatgtggaaatcaccgacagtgacgagcacgatctgttcggcgatgcattgccg
gccaatgtcgcaatccagcagggacgtccgttgaatctgcagatggtgtaa
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