Xanthomonas arboricola: XB05_08935
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Entry
XB05_08935 CDS
T06096
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xar
Xanthomonas arboricola
Pathway
xar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XB05_08935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xar03000
]
XB05_08935
03400 DNA repair and recombination proteins [BR:
xar03400
]
XB05_08935
Enzymes [BR:
xar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
XB05_08935
Transcription factors [BR:
xar03000
]
Prokaryotic type
Helix-turn-helix
AraC family
XB05_08935
DNA repair and recombination proteins [BR:
xar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XB05_08935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AKC78839
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All DBs
Position
2102456..2103919
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AA seq
487 aa
AA seq
DB search
MQIATPDRLQCDRARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPGNISYYPSAAAA
SAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIADGALQEQPVQTLADAVGLSARQLQ
RQFVQQLGATPIQVHGTRRLLLAKQLLTETALPVTEVALAAGFNSLRRFNAAFLEGCGMP
PSALRKQRAEVPGGELTLRLGYRPPLDLPAMLAFLQRRAIPGIEQVDASGYRRVIGTPGK
ATLIEVSAAPQRAELLLRIGATDPRQIPQIVRRVRRLFDLDADLQAVHATLATEPLLAEA
IARRPGLRVPGGWDGFEVAVRAVLGQQISVAGAATLAARLVDRHGGHHLEMPPGLDRIFP
TPAQLAEAPLEQLGLPRARAATLRALASACAQGQLHFGAGQRLSEFVAACTALPGIGPWT
AHYVAMRALSHPDAFPAGDLILQQVLGTPERLSERATEARSQAWRPWRAYAVLHLWHLAV
DRKDTRS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgccacgcccgaccgactccaatgcgaccgcgcccgcctggcgcgcgatgca
cgcttcgacggcttgttcttcaccgcggtgcgcagcaccggcatctactgccggccggtg
tgtccggcgccgccgcccaagccaggcaacatcagctattaccccagcgcggcggcagcc
agtgccgccggctaccggccctgcctgcgctgccgccccgagctgtcgccgcaggcgcag
cagcatctgggcgaagaaagcgtgcaacgcgcactggcgatgattgccgacggtgccctg
caggagcagccggtgcagaccctggccgacgcggtgggcctgagcgcacgccagctgcag
cggcagttcgtgcagcagctcggtgccacgccgatccaggtgcatggcacgcgccggctg
ctgctggccaagcaactgctgaccgagaccgcattgccggtcaccgaggtcgcactggcg
gccggcttcaacagcctgcgtcgcttcaatgccgcgttcctggaaggctgcgggatgccg
ccgtcggcgctgcgcaagcagcgtgccgaggtgccgggtggcgagctgaccctgcgcctg
ggctatcgcccgccgctggatctgccggcgatgctggcattcctgcaacgccgcgcgatt
cccggcatcgagcaggtcgacgccagcggctaccggcgcgtgatcggcacaccgggcaag
gcaaccctgatcgaggtcagcgcggcgccgcagcgtgcggagttgttgctgcgcatcggc
gcgaccgacccgcggcagattccgcagatcgtgcggcgggtgcgccggctgttcgatctg
gatgcggacctgcaggcggtgcatgccacgctggcgaccgagccgctgctggccgaggcg
atcgcgcgccgccccgggctgcgcgtaccaggtggctgggacggcttcgaagtggccgtg
cgcgccgtgctgggccagcagatcagcgtggccggcgcggcgacgctggcggcgcggctg
gtcgaccggcatggcggccatcatctggagatgccgcccggcctggaccgcatctttccg
actccggcacagctggccgaggcgccgctggaacagctcggcctgccgcgggcgcgcgcg
gccacgctgcgtgcattggcctcggcctgcgcgcaagggcagctgcacttcggcgccggc
cagcgcctgtccgagttcgtcgccgcctgcaccgcgttgcccggcatcgggccgtggacc
gcgcattacgtcgcgatgcgtgcgctgtcgcatccggacgcgtttccggctggcgacctg
atcctgcagcaggtgctcggcacgcccgagcgcctgagcgagcgcgccaccgaagcgcgc
tcgcaggcctggcggccgtggcgcgcctacgccgtattgcacctgtggcatctcgctgtc
gatcgcaaggacacccgctcatga
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