Xanthomonas arboricola: XB05_08965
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Entry
XB05_08965 CDS
T06096
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
xar
Xanthomonas arboricola
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xar02000
]
XB05_08965
Transporters [BR:
xar02000
]
Other transporters
Pores ion channels [TC:
1
]
XB05_08965
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AKC78845
LinkDB
All DBs
Position
2108326..2110392
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AA seq
688 aa
AA seq
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MHPRLASSFRRSTLSLALTSLLTPALALAEDAPAAADPQTPPSSDTRHDATASSGRHIKD
LDKVVVTASPLRDAAGELSRPVEVLAGERLDEVRSSSLGETVASLPGVQSSNFGPGVGRP
IIRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQIEVLKGPSTLLYGSGAIGGV
VNVVDGRIAETPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDY
DTPQGRQLNSWIDSKVGSVGASLSGDWGFVGLSASRFRDNYGNPGEPGDPTIGERGVSLK
LQQDRYDLKGGLTDPWGEGSALRYSFGHTDYAHTEFEGAEVGTVFTKRANEGRVEASFTF
GGGWQTAFGLQGSDTTFQAIGEESFVPKTDTRSLGVFGVARNSWERVTAEVGARVDKVKY
RTDIGVDRDFTPTSFSASGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAYEIG
DADLKTEKANQAELGLNFQNTWVDAKIAAYYNRYNDFVYIVDTGGQWFNEEDNDFLPIRQ
WTQNDAVFHGFEGEATFHLADNDTGAWDLRVFGDTVRARLKDGGNLPRIAPGRVGAQMRW
NADAWRASLGATRTMKQDKVAVNETPTDGYTFVDAHLAYHVDRGSNAWEVFLDGNNLTNQ
DARVHTSFLKDDVMLPGRSASFGVRLFF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctcgcctcgcttcctcgttccgccgctccacgctctcgctggcgctgaccagc
ctactgacgcccgccctggccctggccgaggacgcaccggcagctgccgacccgcagacc
ccgcccagctcggacacgcgccacgacgccaccgcttccagtggccgccatatcaaggac
ctggacaaggtcgtggtcaccgccagcccgctgcgcgatgcggccggcgagttgagccgc
ccggtcgaggtgctggccggcgagcgtctggacgaggtacgcagctccagcctgggcgag
accgtggccagcctgcccggcgtgcagagttccaacttcggccccggcgtcggccggccg
atcatccgtggcctggacggcccgcgcgtggcggtgctgcgcgatggcctgtcgacccag
gacgtgtccacggtcagccaggaccactcgccggcgatcgagccgttcctggccaaccag
atcgaggtgctcaagggtccgtccacgctgctgtacggctccggcgcgatcggcggcgtg
gtcaacgtggtcgacgggcgcattgccgaaaccccggtggacggcttcagcggccgcgcc
gaagtgcgcttcgacggcggcgacaaggacggcaacaccgacatgttccgcgtcgatgcc
ggcaatggcagcggcctgtcgatccacgccgacggcgtgtaccgcaaccagaacgattac
gacaccccgcaggggcgccagctcaacagctggatcgactccaaggtcggctcggtcggc
gcctcgctgtccggcgactggggtttcgtcggcctgtcggcctcgcgcttccgtgacaac
tacggcaaccccggcgagccgggcgacccgacgatcggcgagcgcggggtgtcgttgaag
ctgcagcaggaccgctacgacctcaagggcgggctgaccgatccctggggcgaaggcagc
gcgctgcgctacagcttcggccacaccgattacgcgcacaccgaattcgaaggcgccgaa
gtcggcaccgtgttcaccaagcgcgccaacgaaggccgcgtggaagcctcgttcaccttc
ggcggcggctggcagaccgcgttcggcctgcagggcagcgacaccaccttccaggcgatc
ggcgaggaatccttcgtgcccaagaccgacacccgctcgctcggcgtgttcggcgtcgcg
cgcaacagctgggagcgcgtcaccgccgaagtcggcgcgcgcgtggacaaggtcaagtac
cgcaccgacatcggcgtggaccgcgacttcaccccgaccagcttctcggccagcggcggc
ttccgtttcaacgaacagtggcgcctgaccgccaacctcgaccacgccgaacgcgcaccg
gccgaggaagagctgttcgccaacggcccgcatatcgccaccctcgcctacgagatcggc
gatgcggatctgaagaccgaaaaggccaatcaggccgagctgggcctgaacttccagaac
acatgggtggatgccaagatcgccgcgtactacaaccgctacaacgacttcgtctacatc
gtcgataccggcggccaatggttcaacgaagaagacaacgacttcctgccgatccgccag
tggacgcagaacgatgcggtcttccacggcttcgaaggcgaggccaccttccatctggcc
gacaacgacaccggcgcgtgggatctgcgcgtgttcggcgacaccgtgcgtgcgcgcctg
aaggatggcggcaacctgccgcgcatcgccccgggccgcgttggcgcgcagatgcgctgg
aacgccgatgcatggcgcgcctcgctcggcgccacccgcaccatgaagcaggacaaggtg
gcggtgaacgaaaccccgaccgacggctataccttcgtcgatgcgcatctggcctaccac
gtggaccgtggcagcaacgcgtgggaagtgttcctggacggcaacaacctgaccaaccag
gacgcacgcgtgcacacctccttcctcaaggacgacgtgatgcttcccggccgcagcgcc
tcgttcggcgtgcgcctgttcttctga
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