Xanthomonas arboricola: XB05_10595
Help
Entry
XB05_10595 CDS
T06096
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xar
Xanthomonas arboricola
Pathway
xar00300
Lysine biosynthesis
xar00470
D-Amino acid metabolism
xar01100
Metabolic pathways
xar01110
Biosynthesis of secondary metabolites
xar01120
Microbial metabolism in diverse environments
xar01230
Biosynthesis of amino acids
Module
xar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XB05_10595
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XB05_10595
Enzymes [BR:
xar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XB05_10595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NACHT_N
Motif
Other DBs
NCBI-ProteinID:
AKC79141
LinkDB
All DBs
Position
2504099..2505295
Genome browser
AA seq
398 aa
AA seq
DB search
MSLHIDMDTVMQALPGIRDQSDGPLCAYVYDLAALDAHAAWMRAQLPADCELFYAAKANA
EPPILHTLAPHVGGFEAASGGELARLHRQQPQAALLFGGPGKLDSELAQAVALPDCTVHV
ESLGELERLAAIAAQAGRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPDDLDAAIQR
LHASPSLRLEGFHFHLMSHQRDAGAQLHLIAAYLRTVQQWRQSYGLGPLRVNAGGGFGVD
YLAPESSFDWAGFCAGLPALLREHGQALRLRLEPGRYVSASCGWYLMDVLDLKRSHGAWF
AIARGGTHHFRTPAAQGHDHPFRVLRGRHAPVLRDTPVTLVGQLCTPKDVLARNQPVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLTQGH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcacatcgatatggacaccgtgatgcaggcattaccgggcatccgcgaccaa
agcgatggcccgctgtgcgcctacgtctacgacctggccgccctggatgcgcatgcggcc
tggatgcgcgcgcaactgccggccgactgcgagctgttctacgcggcaaaagccaatgcg
gagccgccgatcctgcacacgctcgccccgcacgtgggtggcttcgaggcagcctccggc
ggcgaactggccaggctgcatcggcaacaaccccaggccgcgttgttgttcggcggccct
ggcaagctcgatagcgaactggcccaggccgtcgcgctgcccgactgcaccgtgcatgtg
gaaagcctgggcgaactggaacgcctggccgcgatcgcggcgcaggccggccgctgcgtg
ccggtgttcctgcgtatgaacatcgccgtgcccggcgcgcagagcacgcgcctgatgatg
ggcgggcagccctcgccgttcggtctggacccggacgatctggacgcggcgatccagcgg
ctgcatgccagcccctcgctgcgattggaaggcttccatttccatctgatgtcgcaccag
cgcgatgccggcgcgcagctgcatctgatcgctgcctacctgcgcaccgtgcagcagtgg
cggcagagctacggactcggcccgttgcgggtgaatgcaggcggcggcttcggtgtggat
tatctggcgccggaatcgtcgttcgactgggccggcttctgcgccgggctgcctgccttg
ctacgcgaacacggccaggcactgcggctgcggctggaacccgggcgctatgtcagcgcc
agctgcggctggtatctgatggacgtgctggacctcaagcgcagccacggcgcgtggttt
gcgattgcccgcggcggcacccatcacttccgcaccccagccgcgcaaggccacgatcat
ccgttccgcgtattgcgtggcaggcacgcgccggtgctgcgtgacaccccggtcaccctg
gtcgggcagctgtgcacgcccaaggacgtgctggcgcgcaaccaacctgtcgcagcgctg
gcgccaggcgactgcctggctttcccgctggccggtgcgtatgcgtggaatatctcgcac
cagcagttcctgatgcatccgccgccgcagatggtgttcctaacgcaggggcattga
DBGET
integrated database retrieval system