Xanthomonas arboricola: XB05_12630
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Entry
XB05_12630 CDS
T06096
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xar
Xanthomonas arboricola
Pathway
xar00040
Pentose and glucuronate interconversions
xar01100
Metabolic pathways
xar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XB05_12630
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XB05_12630
Enzymes [BR:
xar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XB05_12630
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AKC79493
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All DBs
Position
complement(3045446..3046579)
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AA seq
377 aa
AA seq
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MKPKFSTAAAASLFVGSLLVVGVACADPALEVATTGWATQNGGTKGGSKAAAANIYTVKT
AAELKSALKASVGSNGRIIKISGIIDVSEGKPYTKTSDMKSRARLDIPTKTTLIGITSNA
EIREGYFYVKANDVIIRNITIENPWDPEPVWDPDDGSAGNWNSEYDGLTVEGATNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANFVTISYSAFKSHEKNDLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNKVYPFSHAHGVGKESK
IFSERNVFDISGVSSCDKIAADYGGSVYRDQGSLLNGKALTCSWNSNIGWTPPYTYSLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcaacggcggccgccgcgtcgctgtttgtcgggtcgttgctggtc
gttggcgttgcctgcgccgatcctgcactggaagttgcaaccactggttgggcaacccag
aacggggggaccaagggcggctccaaggcggccgctgccaacatctacacggtcaagact
gccgccgagctgaagagcgcgctgaaagccagcgtgggcagcaacgggcgcatcatcaag
atcagcggcatcatcgatgtcagcgagggcaagccgtacaccaagacctcggatatgaag
agccgcgcgcggctggacatcccgaccaagaccacgctgatcggcatcaccagcaacgcg
gaaattcgcgaaggctatttctacgtcaaggccaacgacgtcatcatccgcaacatcacc
atcgaaaatccatgggatccggagccggtctgggacccggatgacggcagtgccggcaac
tggaattccgagtacgacggcctcacggtcgagggtgcgaccaatgtgtgggtggaccat
gtcaccttcaccgatggtcgccgcaccgacgatcagaacggcaccgccaacggacgcccc
aagcagcatcacgacggtgcgatggatgtcaagaagggcgccaacttcgtcaccatttcc
tactcggcgttcaagtcgcacgagaagaacgacctgatcggctccagcgacagcgcctcc
agcaccgacagcggcaagctcaaggtgaccatccacaacaccttgttcgagaacatttcc
gcacgcgcgccgcgggtgcgcttcggccaggtgcacctgtacaacaactatcacgtcggc
agcaccagcaataaggtctacccgttctcgcacgcgcacggcgtgggcaaggagtccaag
atcttctccgagcgcaacgtgttcgacatcagtggggtgagcagctgcgacaagattgcg
gccgattacggcggcagcgtgtaccgcgaccagggctcactgctcaacggcaaggcactg
acctgctcgtggaatagcaacatcggttggaccccgccgtacacctatagcctgctgtcg
gccgacaaggtcgctgcggacgtcaaggcaaaagccggcgcaggcaagctgtaa
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