Xanthomonas arboricola: XB05_14465
Help
Entry
XB05_14465 CDS
T06096
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xar
Xanthomonas arboricola
Pathway
xar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XB05_14465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xar03400
]
XB05_14465
Enzymes [BR:
xar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
XB05_14465
DNA repair and recombination proteins [BR:
xar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XB05_14465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AKC79827
LinkDB
All DBs
Position
complement(3441303..3442103)
Genome browser
AA seq
266 aa
AA seq
DB search
MRIISFNANGLRSAVTKGFFEWFADQDADVLCVQETKAQEHQLAGPKFLPSGYKAWFRDA
STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYVEARFGNLSVVSFYIPSGSSGELRQ
GYKFQVMEWLRPILEQWLASGRQYVLCGDWNIVRSALDIKNWKSNQKNSGCLPPERDWLN
GLCADALEDANAASGRGWVDTYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLR
DKVKACSIYREQRFSDHAPYIVDYAE
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatcagtttcaacgccaacggcctgcgctcggccgtcaccaagggtttcttc
gagtggttcgccgaccaggatgccgacgtgctgtgcgtgcaggagaccaaggcccaggag
catcagctggccggtcccaagttcctgcccagcggctacaaggcctggtttcgcgacgcc
agcaccaagaagggctacagcggcgtggccatctacagcaggcacgagcccgatgaagtg
cgcaccgcgctgggctggcccgagttcgacgaagaaggccgctatgtcgaagcgcgcttc
ggcaacctcagcgtggtgtccttctatatcccgtccggctcgtcgggcgagttgcgccag
ggctacaagttccaggtgatggaatggctgcggccgatcctggagcagtggctggccagt
ggccggcagtacgtgctgtgcggcgactggaacatcgtgcgctcggcgctggacatcaag
aactggaagtccaaccagaaaaattccggctgcctaccgcccgagcgcgactggctcaac
ggcctgtgcgccgatgcgctggaagacgccaacgccgccagcggccgcggctgggtcgac
acctaccgcgtgctgcatccccagggccaggactacacctggtggagcaaccgcggcgca
gcgcgcaccaacaacgtcggttggcgcatcgactaccaactggtcacccccggcctgcgc
gacaaggtgaaggcctgctccatctaccgcgagcagcgcttctccgaccacgcgccgtac
atcgtggattacgcggagtga
DBGET
integrated database retrieval system
