Xanthomonas arboricola: XB05_16535
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Entry
XB05_16535 CDS
T06096
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xar
Xanthomonas arboricola
Pathway
xar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XB05_16535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xar03400
]
XB05_16535
Enzymes [BR:
xar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XB05_16535
DNA repair and recombination proteins [BR:
xar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XB05_16535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AKC80176
LinkDB
All DBs
Position
complement(3938719..3942123)
Genome browser
AA seq
1134 aa
AA seq
DB search
MHATSAPDFRLYPSNALDTLAALLAQELRRPVPEQPLLQPEVVLIPQVAMRRWLQSTLAA
EHGVAANLEFLTPGEFVARALECNLGPADDDLDMATTQWRLYTALQADLGSDAALAPLAG
YLSDGDALKPWALAGELGNVFEKYQAWRRDWLLRWEGGADPDDPQARLWRSIATGRQYRA
RRIGQYLDRYARPDGPLPQGLPRRLFAFAILNISPDVLRVLATQARVGTLHFYLPTPTQG
YWGDLQTLWQRRREDGAVQLFAEQVQENPLLQAWGAAGRDFMALVGDYEVVHPLAEIAAY
ADPLESGRRALADGGLGDSLLRRMQSDLFHRRAPSVPAALPAVNLHDPSLQVHACHTRLR
ELQVLHDQLRALLDDARFDPPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALAD
ASPLASEPLAEVFLSLLGLPIARFGLHEILDLLASAPIAEAAGLDEAGLERLRGWLHAAG
ARWGLDAAHRRQHQAPGDDAYTWRFALDRLLLGHASGTDDDIEGVAPWPQLEGSALAALD
ILLKLLRVLERHQSLLAEAMTPVEWRERLLGLLEALMPKAPSAPRAQRALDRLRTLIDQF
ARDAVRAEYAGSVPAEVVRAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRVICLLG
MNDGDFPRRDPAAGLNRLTAELGTERRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGA
DARDGSAREPSVLVSELLGSAAQYHADPAAIDTLVVHHPLQPFAAAAFGAPGDHGADPRR
FSYRRQWRPAVDSLTGQRQPLAPWVAGALPADDIAVPTNVSIDELRRLFADPAGQFLRHR
LGMRLPDPAGEDSDLEPLLAPTRGLEQYGLQQHVFDAALAGHTERLYERLRARALLPSGP
LGRRQLDERVAQLRPYAEAFRHWRGEEPAQSRRLQVQIGQTEVHGRVPGWYASGVGRVQV
GALSGRSAIRHGLEWLLLRAAGEHAPYVRFFEDEDGLGPHPIDAEPLSQTQAQGALAALL
QMYRQGLQTPLAFAPYSSWKYHQAARSDDLDKAIKEAAGQWQSSFGWSESHSPELRLVNR
GRDPFADAQRFADFAITSHRVYDLLERGNADATLDPERLIESWRHWHGAQEEAE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccacttccgcgcccgatttccgcctctatccctcaaatgcgctggatacgctg
gctgccttgctcgcacaggagctgcgccggccggtgccggagcagccgttgctgcagccg
gaggtggtgctgatcccgcaggtggcgatgcggcgctggctgcagtccacgctggcggcc
gagcacggagtggcggccaatctggaattcctcacccccggcgaattcgtcgcgcgcgcg
ctggaatgcaatctcggcccggccgacgacgacctggacatggcgaccacgcagtggcgc
ctctataccgccttgcaggccgatctgggcagcgacgcggcgttggcgcccctggccggt
tatctgtccgatggcgatgcgctcaagccctgggcgctggccggcgagctgggcaatgtg
ttcgagaagtaccaggcctggcgacgcgactggttgctgcgctgggaaggcggcgccgac
cccgatgatccgcaggcgcggctgtggcgcagcattgccaccggccggcaataccgcgcg
cgccgcatcggccagtatctggatcgctacgcgcgcccggacggcccgctgccgcagggc
ttgcccaggcgcctgttcgccttcgccatcttgaatatttcgcccgacgtgctgcgcgtg
ctggccacgcaggcgcgcgtgggcacgctgcatttctacctgcccacgcccacgcaaggt
tactggggcgacctgcaaaccctgtggcagcgccgtcgcgaagacggtgcggtgcagctg
tttgccgagcaggtgcaggaaaacccgctgctgcaggcctggggcgcggccgggcgcgac
ttcatggcattggtcggcgactacgaggtggtgcacccgctggccgagatcgccgcctac
gccgacccgctggagtccggccgccgcgcactggccgacggcggcctgggcgacagcctg
ctgcggcgcatgcagagcgacctgttccatcgccgcgcgcccagcgtgcctgccgcgttg
ccggcggtgaatctgcacgaccccagcctgcaggtgcacgcctgccacacccgtctgcgc
gagctgcaggtgctgcacgaccagctgcgcgccttgctcgacgatgcgcgcttcgacccg
ccgctgcagccgcgcgagatcgcggtgctgtcgccaaatatcgacccgtacgtgccgtat
ttggacgcggtgttcggcagccacggcaacgacgacgcgctgccgtatgcactggccgat
gccagcccgttggccagcgagccgctggccgaagtgttcctgagcttgctcggcctgccg
atcgcacgcttcggcctgcacgagatcctcgacctgctcgccagtgcgccgatcgccgag
gccgccggcctagacgaagccgggctggaacgtctgcgcggctggctgcatgcggccggc
gcgcgctgggggctggatgcggcgcaccggcgccagcatcaggcaccgggcgacgacgcc
tacacctggcgcttcgcgctggaccggctgctgctcggccatgcgagcggcaccgacgac
gatatcgagggtgtggcgccctggccgcagctggaaggcagcgcgctggccgcactggat
atcttgttgaagctgctgcgcgtgctcgaacgtcaccaatctttattggccgaggcgatg
acgccggtcgagtggcgcgagcggctgctcggcctgctggaggcgctgatgccaaaagcg
ccctcggcaccgcgtgcgcagcgcgcgctggatcggctgcgcaccttgatcgaccagttc
gcccgcgatgcggtgcgcgccgagtacgcaggcagcgtgccggccgaagtggtgcgcgcg
cattttgctgcggtgctgggcgagtcggacacgcgtgcgccgctgctcaccggcggcatc
agtttcggccgtatggtgccgatgcgcttgctgccgttccgcgtgatctgcctgctcggc
atgaacgatggcgacttcccgcgccgcgacccggccgccgggctcaatcgcctcaccgcg
gaattgggcaccgagcgtcgccggcacggcgaccgttcaacccgcgaggacgacaggttc
ctgttcctgcagttgttcgcctccgcgcaggaagtgttctacctgagctatctcggcgcc
gatgcgcgcgacggcagcgcgcgcgaaccgtcggtgctggtcagcgagctgctgggcagc
gccgcgcagtaccacgccgacccggcggcaatcgacacgctggtggtgcaccacccgttg
cagccgtttgccgccgccgccttcggtgcgccgggcgatcacggcgccgacccgcgccgt
ttcagctatcgccggcagtggcgccccgcggtggacagccttaccggccagcgccagccg
ctggcgccctgggtggccggtgcgttgccggccgatgacatcgcagtgccgacgaatgtg
tcgatcgacgaactgcgccgcctgttcgccgacccggccgggcagttcctgcgccaccgc
ctgggaatgcgcctgccggatccggccggcgaagacagcgatctggagccgctgctcgcg
cccacgcgcgggctggagcaatacggcctgcagcagcatgtgttcgacgccgcgctggcc
ggccacaccgagcggctctacgagcgtctgcgcgcgcgcgcgttgctgccgtccgggccg
ctggggcgacgccagctcgatgagcgggtggcgcaactgcgcccgtatgccgaggcattc
cggcactggcgcggcgaggagcctgcgcagtcgcgccggttgcaggtgcagatcggccag
accgaggtgcacggccgtgtgcccggctggtatgcgagcggggtggggcgggtgcaggtc
ggcgcgctcagcggccgcagcgcgatccgccacggcctggaatggctgctgctgcgcgcc
gccggcgagcacgcgccctacgtgcgcttcttcgaggacgaagacggtttgggcccgcat
cccatcgatgccgagccgctgtcgcagacccaggcgcagggcgcgttggctgcgctgctg
cagatgtaccggcagggcttgcagacgccgctggcgttcgcgccctatagcagctggaaa
taccaccaggccgcgcgtagcgacgacctggacaaggccatcaaggaggccgccgggcag
tggcagtccagcttcggctggagcgagtcgcacagcccggaactgcgcctggtcaaccgc
ggccgcgacccgttcgccgatgcgcagcgctttgccgatttcgccatcaccagccaccgc
gtgtacgacctgctcgagcgcggcaacgccgatgccacgctggatccggagcgattgatc
gagagctggcgccactggcacggcgcgcaggaagaggccgaatga
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