Xanthomonas arboricola: XB05_16895
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Entry
XB05_16895 CDS
T06096
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xar
Xanthomonas arboricola
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xar03032
]
XB05_16895
03400 DNA repair and recombination proteins [BR:
xar03400
]
XB05_16895
Enzymes [BR:
xar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XB05_16895
DNA replication proteins [BR:
xar03032
]
Prokaryotic type
DNA Topoisomerases
XB05_16895
DNA repair and recombination proteins [BR:
xar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XB05_16895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AKC80241
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All DBs
Position
4031354..4032541
Genome browser
AA seq
395 aa
AA seq
DB search
MKAKRVLRNAAATASAAGKLATVAAGAVAATAAVASVAAVAQAKATARAAGLTYVNDQQP
GISRRKAGKSFSYRSADGQRVADADTLQRIRALAIPPAYTEVWICAKPNGHLQATGRDAR
RRKQYRYHADWAQVRGEGKFERVIAFGQALPKLRRRLRRDLVLPGFPREKVLAIVVALLA
DTLVRVGSAEYARSNRSYGLTTLRNRHMEFLRGGRARLKFRGKSGQDHDIEVDDKQLVKL
IRECQQLPGQSLFQYRDDDGQLQPVDSGEVNDYLREAMGEDFTAKDFRTWGGTLAALQRL
ARLPLPERMSERALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGHLQAMATG
VRGERQWEAATLKFLSASRNKPKARARPASKRKSA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaaacgtgttcttcgcaatgccgccgccaccgccagcgcggccggcaagctg
gccaccgttgccgccggcgcggtggccgccaccgccgcggtggcgagcgtggccgcggtt
gcacaggccaaggccaccgcgcgcgcggccgggctcacctacgtcaacgatcagcagccc
ggcatcagccgccgcaaggccggcaagagcttcagttaccgcagcgcggatggacaacgc
gtggccgatgccgacaccttgcagcgcatccgcgcgctggcgattccgccggcgtatacc
gaggtgtggatctgcgccaagcccaacggccatctgcaggccaccggccgcgatgcgcgc
aggcgcaagcaataccgctaccacgccgattgggcgcaggtgcgcggcgaaggcaagttc
gaacgggtgatcgccttcggccaggcgctgcccaagctgcgccgacggctgcgccgcgat
ctggtcctgccgggatttccgcgcgagaaggtgctggcgatcgtggtggcgttgctggcc
gacacgctggtgcgcgtaggcagcgccgaatatgcgcgcagcaatcgttcctacgggctg
accacgttgcgcaaccggcacatggaattcctgcgcggcggacgtgcgcggctgaagttc
cgcggcaagagcggccaggatcacgatatcgaggtggacgacaagcaactggtcaaactg
atccgcgaatgccagcaattgcctgggcaatcgctgttccagtaccgcgatgacgacggc
cagctgcagccggtggattcaggcgaggtcaacgactacctgcgcgaggcgatgggcgag
gatttcaccgccaaggatttccgcacctggggcggcacgctggcggcattgcaacgtctg
gcacgtttgccgctgcccgagcgcatgagcgagcgcgcgctgacccaggtgcagaacgat
gtcatccgcgaagtggccgatgcgctgggcaatacaccctcggtgtgtcgcaaggcgtat
atcgacccgtgcgtgttcgaaggctggcgcgccggtcacttgcaggccatggccaccggc
gtgcgcggcgagcgccaatgggaggcggccacgctgaagttcttgagcgcttcgcgtaac
aagcccaaggcacgggcaaggcctgcatcaaagcggaagtccgcttga
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