Xanthomonas arboricola: XB05_18515
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Entry
XB05_18515 CDS
T06096
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
xar
Xanthomonas arboricola
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xar03016
]
XB05_18515 (gidA)
03036 Chromosome and associated proteins [BR:
xar03036
]
XB05_18515 (gidA)
Transfer RNA biogenesis [BR:
xar03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
XB05_18515 (gidA)
Prokaryotic type
XB05_18515 (gidA)
Chromosome and associated proteins [BR:
xar03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
XB05_18515 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
Thi4
HI0933_like
AlaDh_PNT_C
Pyr_redox_3
DAO
Motif
Other DBs
NCBI-ProteinID:
AKC80525
LinkDB
All DBs
Position
complement(4403343..4405247)
Genome browser
AA seq
634 aa
AA seq
DB search
MSDSFYRYDVIVIGGGHAGTEAALASARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHL
VKEIDALGGAMARAADQAGIQWRTLNASKGPAVRATRCQADRNLYRNAIRRIVEAQPNLT
VFQAAVDDLIIHNGAAEADSVRGVITQTGLRFEAPSVVLTAGTFLAGKIHVGETQYAAGR
MGDPPATTLAARLRERPFAIDRLKTGTPPRIDGRTLDYSVMAEQPGDDPLPVMSFMGQLG
DHPRQVSCWITQTTEQTHDIIRSALHRSPLYSGQIEGIGPRYCPSIEDKVVRFAEKTSHQ
IFVEPEGLEVAEIYPNGISTSLPFDVQLALVRSIHGFAQAHITRPGYAIEYDFFDPRGLK
ASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARHVQGLPAWSPRRDQAYLGVLV
DDLITHGTTEPYRMFTSRAEYRLQLREDNADARLTGVGRAMGLVDDARWARFSTKQEAVQ
RESARLSVLWATPGNALGREVAQTLGVAVSRETNVLDLIKRPELNYVTLMRVPTLGPGVD
DAQVAEQVEISVKYAGYLDRQRDDIARQQRHETTPIPDGFDYAGVRGLSIEVQQKLERVR
PQSIGQAQRIAGMTPAAISLLLVHLERARRSQVA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccttctatcgctacgacgtcatcgtgatcggcggcggccatgccggcacc
gaggcggcgctggcctccgcgcgcgccggtgcgcgcaccttgctgctgacccacaacatc
gagacggtgggcgcgatgagctgcaacccggccatcggcgggatcggcaagggccatctg
gtcaaggaaatcgacgcgctgggcggggcgatggcacgcgcggcggatcaggccggcatc
cagtggcgcacgctcaatgcctccaaggggccggcggtgcgcgccacccgctgccaggcc
gaccgcaacctctaccgcaacgccatccgccgcatcgtcgaggcgcagccaaacctgacc
gtgttccaggcggcggtggacgatctgatcatccacaacggcgccgccgaagccgacagc
gtgcgcggcgtgatcacccagaccgggctgcgcttcgaagcgccctcggtggtgctgacc
gccggcaccttcctggccggcaagatccacgtcggcgagacccagtacgcggccggacgc
atgggcgacccgccggccaccacgctggccgcgcgtctgcgcgagcggccgttcgcgatc
gaccggctcaagaccggcaccccgccgcgcatcgacggccgcacgctcgactacagcgtg
atggccgaacaacccggcgacgatccgctgccggtgatgtcgttcatgggccagctcggc
gatcacccgcgccaggtcagctgctggatcacccagaccactgagcagacccacgacatc
atccgcagtgcgctgcatcgctcgccgctgtattccgggcagatcgaaggcatcggcccg
cgttactgcccgtcgatcgaagacaaggtggtgcgctttgccgagaagaccagccaccag
atcttcgtcgagcccgaaggcctggaagtggccgagatctatcccaacggcatctccacc
tcgctgccgttcgacgtgcagctggcactggtgcgctcgatccacgggttcgcacaggcg
catatcacccgccccggctacgcgatcgaatacgacttcttcgacccgcgcgggctcaag
gcctcgctggaaaccaaggcggtgggcgggctgttcttcgccgggcagatcaatggcacc
accgggtacgaggaggccgccgcacagggcctgctggccgggctgaatgccgcgcgccat
gtgcagggattgccggcgtggtcgccgcgccgcgaccaggcctacctgggcgtgctggtg
gacgatctgatcacccacggtactaccgagccgtatcgcatgttcaccagccgcgccgaa
taccgcctgcaactgcgcgaggacaacgccgatgcgcgcctaaccggcgtcggccgcgcg
atgggcttggtcgacgatgcgcgctgggcgcgcttctccaccaagcaggaggcggtgcag
cgcgaaagcgcgcgcctgtcggtgctgtgggcgactccgggcaatgcactgggccgcgaa
gtggcccagaccctgggcgtggcggtgagccgcgaaaccaacgtgctggacctgatcaag
cgccccgaactcaactacgtcacgctgatgcgcgtgccgacgctggggccgggcgtggac
gatgcgcaggtggccgagcaggtggagatcagcgtcaaatacgccggctacctggatcgc
caacgcgacgacatcgcgcgccagcagcgccacgaaaccacgccgattccggatggattc
gattatgccggcgtgcgcgggctgtcgatcgaagtgcagcagaaactcgagcgcgtgcgc
ccgcaaagcatcggccaggcgcaacgcatcgccggcatgacgccagcggcgatctcgctg
ctgctggtgcatctggaacgggcgcgccgcagccaggtggcgtaa
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