Xanthomonas arboricola: XB05_19340
Help
Entry
XB05_19340 CDS
T06096
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xar
Xanthomonas arboricola
Pathway
xar03420
Nucleotide excision repair
xar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XB05_19340
03430 Mismatch repair
XB05_19340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xar03400
]
XB05_19340
Enzymes [BR:
xar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XB05_19340
DNA repair and recombination proteins [BR:
xar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XB05_19340
MMR (mismatch excision repair)
Other MMR factors
XB05_19340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
UvrD_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKC80650
LinkDB
All DBs
Position
4602042..4603796
Genome browser
AA seq
584 aa
AA seq
DB search
MNAVPEASPALIAAREAEALVAQCLQDHHSFLLEAGAGAGKTYSLVEALKSLIEHEGPQL
RRDHQRIACITYTNAATSVINSRIDSDPLVFVDTIHAFCWSLIRKFQPALRLLVAAMPEW
EEKLAEVDGIGSRTVEYELGYRRVTADTVTLHHDDVLGLMVSLLPNAKFQALLGQQYPFV
LIDEYQDTDIAVMTSMSEHLLGRAAGPMIGLFGDHWQRIYDKTCGHVAHESLTEIGKKAN
FRSAAKIVDVLNRMRPNLPQALKDEGVVGSAIAFHTNAWQGERRSGAGGGHWKADLPAEM
AHAYLATLIKKLESDGWDLAPQRTKILMLTHNVLASEQGYDSITKIFSYTDQFIKKEDPL
IAFFCDVLEPACAAFQHKRFGEMFSLLGGSAPAVTSYADKVAWSSSMEGLVKIRLDGTIG
KVLDYILEHVQPRLPEAVLGTLRQAAEWHGEEGEEPPRRVQQLRLLRDVFYKEVIALDSF
IDGHTPFATKHSVKGDEFENVLIVIGRGWNKYNFDQFLQWSAEGVPEGKREAYERNRNLF
YVCCSRPTTRLALLFTQELSDTSLALLHNWFGGAIGPAPAPPEG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgtccccgaagccagccccgcgctgatcgccgcgcgggaagcggaagcactt
gtcgcgcaatgcctgcaggatcaccacagcttcctgctcgaagctggcgccggcgcgggc
aaaacctattcactggtggaagcgctcaagtccctcatcgaacatgagggccctcagctg
cgcagggaccaccagcgcatagcttgcatcacctacaccaacgcggccacgtccgtcatc
aacagccgcatcgacagcgacccgctggtctttgtcgacaccatccatgcgttctgttgg
tcgctgatcaggaaatttcagccggcgctgagattactagtcgcggcgatgccggaatgg
gaggagaagctggcagaggtcgatggaatcggcagccggaccgtcgagtacgaactgggc
taccgccgtgtcaccgccgacaccgtcaccttgcaccacgacgacgtcttggggttgatg
gtctctctactcccaaacgcaaaattccaggcgcttcttgggcagcagtacccgttcgtg
ttgatagacgagtaccaggatacggacatagcagtgatgaccagcatgagcgagcacctg
ctcggacgcgcggccgggccaatgatcggcctgttcggcgatcactggcagcgcatctac
gacaagacatgcggccacgtcgcccatgaatctctgacggaaatcggcaagaaggcgaac
ttccgctcagcggccaagatagtcgatgtcctgaataggatgagaccaaacctaccccaa
gcgctgaaggacgagggagtcgttggttcggcgatcgcgttccacaccaatgcctggcag
ggtgaacgccgatccggcgcgggaggtgggcactggaaggccgatcttcccgccgagatg
gctcatgcctacttggcgacgctcatcaagaagctggaatcagacggctgggacctggct
cctcagcgaaccaagattctcatgctcacccacaacgttctggcttctgagcagggctac
gattcgattaccaagatcttttcttatacggatcagttcatcaaaaaagaggatccgctc
attgcattcttttgcgacgtgcttgaacccgcctgtgcggctttccaacacaagcggttc
ggagagatgttttcattgctaggtggctcggcacctgccgtcacttcgtatgcggacaag
gtcgcatggtcgtcctctatggagggcctcgtcaaaattaggctcgatggaactatcgga
aaagtgctggactacatactcgagcatgtgcagcctcgactaccggaggctgtgctcggc
acgcttcgacaggccgcggagtggcatggcgaggaaggggaggagcccccgcgccgggtt
caacaactacggctgctgcgggatgtcttctacaaggaagtcatcgccttggatagcttt
atcgatggtcacaccccgttcgctactaagcacagcgtgaagggtgatgagttcgagaat
gtcctgatcgttatcgggcgcggctggaacaagtacaacttcgaccagttccttcaatgg
tcggccgaaggtgtcccagaaggcaagcgggaagcgtatgagagaaaccgcaatttattc
tatgtctgctgttcccgtccgacaacgcgccttgcgctgctcttcactcaggagctctcc
gacacttcattggcattgctccacaactggttcggcggtgcaatcggacccgcccctgca
ccaccagagggctga
DBGET
integrated database retrieval system
