Xanthomonas arboricola: XB05_19720
Help
Entry
XB05_19720 CDS
T06096
Name
(GenBank) RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
xar
Xanthomonas arboricola
Pathway
xar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XB05_19720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xar03021
]
XB05_19720
Transcription machinery [BR:
xar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XB05_19720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_24
HTH_28
HTH_29
HTH_10
HTH_31
HTH_11
HTH_IclR
PhyR_sigma-like
Rv2175c_wHTH
HTH_38
HTH_Tnp_ISL3
Sigma70_ECF
Fe_dep_repress
HTH_AsnC-type
MarR_2
HTH_7
GerE
HTH_Tnp_4
DUF4143
Motif
Other DBs
NCBI-ProteinID:
AKC80712
LinkDB
All DBs
Position
4702128..4702637
Genome browser
AA seq
169 aa
AA seq
DB search
MSVTQGALHQQVERLYTDHHGWLQGWLRRKLGDAFVAADLAQDTFISVISAGAADEIREP
RPFLATIARRLMAHRQRRKLLETSYLELLAALPEELAPSPELQLLALEAVQQVDQALDGL
PPKVKEAFLLAHLQELSYAQIAQRLGVSSSSVKQYLTRANRHCLFALSA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtcacgcaaggcgcgcttcatcagcaggtggagcgcctgtacaccgaccaccat
ggctggctgcagggctggctgcggcgcaagctgggcgatgcgttcgtggctgccgacctg
gcgcaggacaccttcatcagcgtgatcagcgcaggcgccgccgacgagatccgcgagccg
cgcccgttcctggccaccatcgcgcgccggctgatggcgcaccggcagcggcgcaagttg
ctggaaaccagctacctggaactgctggctgcgctgccagaggaattggcgccgtcgccg
gagctgcaattgctggcgctggaagcggtgcagcaggtggaccaggcgctggatggcctg
ccgcccaaggtgaaggaagcctttttgctggcgcatctgcaggagctgagctacgcgcag
atcgcgcagcggctgggcgtgtccagcagctcggtcaagcaatacctcacgcgtgccaac
cggcattgcctgttcgccctgtcggcgtga
DBGET
integrated database retrieval system
