Xanthomonas sp. SS: HEP74_00035
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Entry
HEP74_00035 CDS
T09534
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
xas
Xanthomonas sp. SS
Pathway
xas03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HEP74_00035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xas03400
]
HEP74_00035
DNA repair and recombination proteins [BR:
xas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HEP74_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QNH14922
LinkDB
All DBs
Position
35030..36004
Genome browser
AA seq
324 aa
AA seq
DB search
MARPIWTGTLSFGLLNVPVALMSGERRVDLHFRMLDARDKRPIRFERVNADTGEEVPWKD
IVKAFEYSKGNYVVVEQKDIASAAPESHETVEVEAFVDAADIDLRYFEKPYVLVPGKKAE
KGYVLLRETLRATGKVGIARVVIRTREYLSAVLPQEDALVLILLRYPQELVALDDYTLPS
GKAADYRISAKETEMAAQLIDSMSGKWDPASYHDEFRERLQAVIQKRIKAQEGTAQVDDE
ADTPQREDAATNVVDFMSLLQKSLDAKRRTPAKKAEALPVSKTAKKPTRKAAKKAAKPAA
KSASKAKPAKKTAASKAPARRKAG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtccgatctggaccggcaccctgtccttcggcctgctcaatgtgccggtggcg
ctgatgtccggcgaacgccgcgtcgacctgcacttccgcatgctcgatgcgcgcgacaag
cggccgatccgcttcgagcgggtcaatgccgacaccggcgaagaggtgccgtggaaggac
atcgtcaaggccttcgaatacagcaagggcaactacgtggtggtcgagcagaaggacatc
gcctcggccgcgccggaaagccacgagacggtggaggtcgaggccttcgtcgacgccgcc
gacatcgacctgcgctacttcgaaaagccctacgtgctggtgccgggcaagaaggcggag
aagggctacgtgctgctgcgcgagacgctgcgcgccaccggcaaggtcggcatcgcgcgg
gtggtgatccgcacccgcgaatacctgtcggcagtgctgccgcaggaagacgcgctggtg
ctgatcctgctgcgctatccgcaggaactggtcgcgctggacgactacacgctgcccagc
ggcaaggccgccgactaccggatcagcgccaaggaaaccgagatggccgcacagctgatc
gactcgatgtccggcaagtgggacccggcgtcctatcacgacgaattccgcgagcgcctg
caggcggtgatccagaagcggatcaaggcgcaggaaggcaccgcgcaggtggacgacgag
gccgacacgccgcagcgcgaggatgccgccaccaacgtggtcgatttcatgtcgctgctg
cagaagagcctggacgccaagcgccgcactccggcgaagaaggcggaggcgctgccggtc
agcaagaccgcgaagaagccgaccaggaaagcggcgaagaaggccgccaagcccgccgcg
aaatccgcgagcaaggccaagccggcgaagaagaccgccgcaagcaaggcgccggcgcgg
cgcaaggcggggtag
DBGET
integrated database retrieval system
