Xanthomonas sp. SS: HEP74_00187
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Entry
HEP74_00187 CDS
T09534
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xas
Xanthomonas sp. SS
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xas03032
]
HEP74_00187
03400 DNA repair and recombination proteins [BR:
xas03400
]
HEP74_00187
Enzymes [BR:
xas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEP74_00187
DNA replication proteins [BR:
xas03032
]
Prokaryotic type
DNA Topoisomerases
HEP74_00187
DNA repair and recombination proteins [BR:
xas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEP74_00187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QNH15069
LinkDB
All DBs
Position
217247..218461
Genome browser
AA seq
404 aa
AA seq
DB search
MSNASRTTAATEAARALQARQAASSAGLVYVSDEAPGIVRRRAGKGFSYRLPDGRPVRDA
QTLQRIRQLAIPPAYTEVWICTKPNGHVQATGRDARRRKQYRYHADWAQVRGDGKFERIM
AFGQALPRLRLRLRRDLALPGYPRDKVLAMVVALMAETLVRVGNAEYARSNRSYGLTTLR
NRHLEFVKGGRARLKFRGKGGQEHDIEVDDARLVKLIRGCQQLPGQALFQYRDDDGQLQP
VDSGEVNDYLREAMGESFTAKDFRTWGGTRAALQRLAQLPLPDPSSERALKLAQNAVIRE
VADALGNTPAVCRKAYIDPCVFDGWRGGELHGLCERVRGERQWDLATLKYLARARAATRK
AAKASGAKKTGSKAAGVKPTKSTVPRRAGSSVAAGNATRSRGRA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcgtcccgcaccaccgccgccaccgaggcggcccgcgcgctgcaggccagg
caggccgccagcagcgccggtttggtctatgtcagcgacgaagcgcctggcatcgtccgc
cgccgcgccggcaagggcttcagctatcggctgccggacggccgcccggtgcgcgatgcg
cagaccctgcaacgcatccgccagctggcgatcccgccggcctacaccgaggtgtggatc
tgcaccaagcccaacggccacgtgcaggccaccggccgcgatgcgcggcggcgcaagcag
taccgctaccacgccgactgggcgcaggtgcgaggcgacggcaagttcgaacggatcatg
gccttcggccaggccttgccgcggctgcgcctgcgcctgcgccgcgacctggcgctgccc
ggctacccgcgcgacaaggtgctggcgatggtggtggcgctgatggccgagactctggtc
cgcgtcggcaacgccgaatacgcgcgcagcaaccgttcctacgggctgaccacgctgcgc
aaccggcacctggagttcgtcaagggtggccgcgcgcggctgaagttccgcggcaagggc
gggcaggagcacgacatcgaggtcgacgacgcgcgcctggtcaagctgatccgcggctgc
cagcaattgcccgggcaggcgctgttccagtaccgcgacgacgacggccagctgcagccg
gtggattcgggcgaggtcaacgactacctgcgcgaggcgatgggcgaaagcttcaccgcc
aaggacttccgcacctggggtggcacccgcgccgcgctgcagcggctggcgcagctgccc
ttgcccgaccccagcagcgagcgcgcgctgaagctggcgcagaacgcggtgatccgcgag
gtggccgacgcgctgggcaataccccggcggtgtgccgcaaggcctacatcgacccgtgc
gtgttcgacggctggcgcggcggcgaattgcacggcctgtgcgagcgcgtgcgcggcgag
cggcagtgggacctggccacgctgaagtacctggcgcgggcgcgcgccgcgacccgcaag
gcggccaaggcctcgggggccaagaagaccggatccaaggcggccggtgtcaagccgacg
aagtccacggtgccgcgtcgggcaggcagcagtgttgcggccgggaacgctacgcgctca
cgcggccgcgcctga
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