Xanthomonas sp. SS: HEP74_00419
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Entry
HEP74_00419 CDS
T09534
Symbol
lrpC
Name
(GenBank) HTH-type transcriptional regulator LrpC
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
xas
Xanthomonas sp. SS
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xas03000
]
HEP74_00419 (lrpC)
03036 Chromosome and associated proteins [BR:
xas03036
]
HEP74_00419 (lrpC)
Transcription factors [BR:
xas03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
HEP74_00419 (lrpC)
Chromosome and associated proteins [BR:
xas03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HEP74_00419 (lrpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR
MarR_2
HTH_20
HTH_IclR
HTH_1
NirdL-like_HTH
HTH_Crp_2
HxlR
HTH_27
HTH_10
DUF7343
DUF501
HTH_47
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
QNH15301
LinkDB
All DBs
Position
480322..480795
Genome browser
AA seq
157 aa
AA seq
DB search
MAAKPWQGDALDHAILETLQCDGRIALAELGRRIGLSQPAMSERVRRLEEQGVITGYAAR
VDPRVVGLATAAIVRLRTTHAQIGACLEQFAQMPQVLEVHRVTGEDCFVLRVLVPAPAQL
EPIIDALARFGAVTTSVVLRSEAPRPIGRALLALAAQ
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgaaaccctggcagggcgatgccctggatcacgcgattctggaaacgttgcag
tgcgacgggcgcatcgcgttggcggagctggggcggcgcatcggcctgtcgcagccggcg
atgtccgagcgcgtgcgccggctcgaggagcagggcgtgatcaccggttacgcggccagg
gtcgatccgcgggtggtgggcctggcgacggcggccatcgtccgcctgcgcaccacgcat
gcgcagatcggcgcgtgcctggagcagttcgcgcagatgccgcaggtactggaagtgcat
cgggtcaccggcgaggactgcttcgtgctgcgcgtgctggtgcccgcgccggcgcagctg
gaaccgatcatcgatgcgttggcacggttcggtgcggtgaccaccagcgtggtgttgcgc
agcgaggcgccgcggccgatcggccgcgcgctgctggcgctggcggcgcagtag
DBGET
integrated database retrieval system
