Xanthomonas sp. SS: HEP74_00571
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Entry
HEP74_00571 CDS
T09534
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xas
Xanthomonas sp. SS
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xas03032
]
HEP74_00571
03400 DNA repair and recombination proteins [BR:
xas03400
]
HEP74_00571
Enzymes [BR:
xas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEP74_00571
DNA replication proteins [BR:
xas03032
]
Prokaryotic type
DNA Topoisomerases
HEP74_00571
DNA repair and recombination proteins [BR:
xas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEP74_00571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
PGM_PMM_IV
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QNH15449
LinkDB
All DBs
Position
complement(665536..668034)
Genome browser
AA seq
832 aa
AA seq
DB search
MSKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIEKN
EKHVEAIAKAAKVAEDIYLATDPDREGEAISWHIAEILKERGLLKDKPLHRVVFTEITPR
AIKEAMANPRQIAVDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWSIGADCLHPSQPFAAKLVKLDGQKFEQFTITDGDTAEAARMRLQK
AAQGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTSRTMRVAQKLYEGVTLGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDFGTGALPDKPNMYQTKSKNAQEAHEAIRP
TAALRTPTQMAKYLDDDGRRLYELIWKRAVACQMVPATMNTVTVELAAGNEHSFRASGTT
VIDPGFLAVYEEGKDQKAAEDEDEGRKLPAMKPGDRIPLDRIHADQHFTEPPPRYSEASL
VKTLEEYGIGRPSTYASIIQTLLFRKYVELDARRFRPSDVGRAVSKFLSGHFTRYVDYDF
TAKLEDELDAVSRGEEEWRPLMEKFWGPFKELVEEKKESVDRSEATGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTITLEDALELFLMPRALGEDKGE
DVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEYEGSDI
QVLNGRFGPYISDGKLNGKIPKDREPATLTLEEVQKLLEETGKPARRGFGAKKAAAKKEA
APKKSAAKKAAADAPAKPAAKKAVKKAAKKAAKKTAKKAAKKVVKKAVAKPA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttccacgtcctggcctcgtatgggcacgtgcgcgacctgatcccgaaa
gagggcgcggtggatccggacgacggcttcgcgatgcgctacgcgctgatcgagaagaac
gagaagcacgtcgaggccatcgccaaggccgccaaggtcgccgaagacatctatctggcg
accgaccccgatcgcgagggcgaggcgatcagctggcacatcgcggagatcctcaaagag
cgcgggctgctcaaggacaagccgctgcaccgggtggtgttcaccgaaatcaccccgcgc
gcgatcaaggaagcgatggccaacccgcggcagatcgccgtggacctggtcgatgcgcag
caggcgcggcgcgcgctggactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaggaagagatcgaagccttcgtcgcccgcgaatactggagcatcggcgccgac
tgcctgcacccctcgcagccgttcgcggccaagctggtcaagctcgacgggcagaagttc
gagcagttcaccatcaccgatggcgacaccgccgaagcggcgcggatgcgcctgcagaag
gccgcgcagggcgcgctgcacgtcaccgacgtggccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
accagccgcaccatgcgcgtggcgcagaagctgtacgaaggcgtgaccctgggcgacgag
ggcacggtcggcctgatcagctacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggccgagatccgcgacgtgatcgcgcgcgacttcggcaccggcgcgctgccggacaag
ccgaacatgtaccagactaagtccaagaacgcgcaggaagcgcacgaggcgatccgcccg
accgccgcgctgcgtacgccgacgcagatggccaagtacctggacgacgacggccgccgc
ctgtacgagctgatctggaagcgcgcggtggcctgccagatggtgccggcgacgatgaac
accgtcaccgtggaactggctgcgggcaacgagcacagcttccgcgccagcggcaccacg
gtgatcgacccgggctttttggccgtgtacgaagaaggcaaggaccagaaggccgcagag
gacgaggacgagggccgcaagctgccggcgatgaagcccggcgaccgcatcccgctcgac
cgcatccatgccgaccagcacttcaccgagccgccgccgcgctactcggaagcctcgctg
gtcaagaccctcgaggaatacggcatcggccgcccgtcgacctatgcctcgatcatccag
accctgctgttccgcaagtacgtggagctggacgcgcgccgtttccgcccctccgacgtc
ggtcgcgcggtcagcaagttcctgtccggccacttcacccgctacgtcgactacgacttc
accgccaagctcgaggacgagctggacgcggtgtcgcgcggcgaggaggaatggcggccg
ctgatggagaagttctggggcccgttcaaggaactggtcgaggagaagaaggaatcggtg
gaccgctccgaggccaccggcgcgcgcgaactcggcaccgaccccaagaccggcaagccg
gtcagcgtgcgcctgggccggttcgggccgtacgcggcgatcggcagcaccgccgaggac
gccgaggacaagcccaagttcgcctcgctgcggccgggccagagcatgcacaccatcacc
ctggaagacgcgctggagctgttcctgatgccgcgcgcgctgggcgaggacaagggcgag
gacgtcagcgtcggcatcggccgcttcgggccgttcgccaagcgcggcagcgtctatgcc
tcgctgaagaaggaagacgatccgtacaccatcgacctggcgcgcgcggtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccgcatcatcaaggaatacgaaggcagcgacatc
caggtgctcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatc
cccaaggaccgcgagccggccacgctgaccctggaagaagtgcagaagctgctggaagag
accggcaagccggcacgccgcggcttcggcgcgaagaaggccgcggcgaagaaggaagcg
gcgccgaagaagagcgcagccaagaaggccgcggccgacgccccggccaagcccgcggcg
aagaaggcggtcaagaaggccgcgaagaaggccgcgaagaagaccgcaaagaaggcggcc
aagaaagtggtcaagaaggccgtggccaagcccgcctga
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