Xanthomonas sp. SS: HEP74_00880
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Entry
HEP74_00880 CDS
T09534
Name
(GenBank) GGDEF domain-containing protein
Organism
xas
Xanthomonas sp. SS
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS
PAS_4
PAS_8
PAS_7
RskA_C
Motif
Other DBs
NCBI-ProteinID:
QNH15757
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Position
complement(1059883..1062102)
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AA seq
739 aa
AA seq
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MSIEHVAAGIAGYAGTDWRWGWAAAAAILAVAAVVSALQALHWRRRMQQQQKRQQQLQQR
DRHLKLALWASGEHFWDYDLQQRKLRRMRADEAAPHAQEITMVIREDDPLRIHPDDVPQA
ERALREHLQGLTPVYVAEYRVDLAGDGVWLWARVRGRVVDYDAAGKPRRLAGTARDITSH
RQADLERRIASEVLRSMSEAVAVLDEDLRFISVNPAFTRITGYSEREVLGQPMTLLDHAP
DVPAAPSLEHGRSWRGDAWKRRKDGLEILCHVRRNTVGDADGRHSFHVVVLEDITDQKRA
EQELRYLANYDTLTSLPNRALLSERLARSIVRARRQGSSVAVLFLDLDRFKDINDSLGHA
VGDRVLRAVAERLQQAVGPQHTVARLAGDEFTVVVEDIADQAEAEAVATRVLAAFDAPLQ
LEDRREVAISSSIGISLFPQHALLPSELLKHADTAMYQAKAAGRRNVQVYSARMDEATRH
RATLASSLRKIPFDQELKLVYQPRYSLREQRVVGVEALLRWHSADFGTVSPSQFIPLAEE
TGLILEIGEWVLRQACSTLRDWRQLGLTDLCMSVNVSAIQLERGDLPALMARILAETGVP
AANVELELTESVVMSQVGKNAATLHACRALGLALAIDDFGTGYSSLAYLKRLPINTLKID
QEFIGDLTRDPDDEAITSTIIAMGHSLTLKVVAEGVELPGQLAFLRQHGCDEIQGHLVAP
ALEPDACLQLLRQPLLLPA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgagcacgtcgctgcgggaattgccggatatgccggaacggactggcgctgg
ggctgggccgccgcagcggcgatcctggcggtggccgcggtggtttccgcgctgcaggcg
ctgcactggcggcggcgcatgcagcaacagcagaaacgccagcagcagttgcagcagcgc
gaccgccacctgaagctggcgctgtgggcctccggcgagcacttctgggactacgacctg
cagcaacgcaagctgcgccgcatgcgcgccgacgaagcggcgccgcacgcgcaggagatc
accatggtgatccgcgaggacgatccgctgcgcatccaccccgacgacgtgccgcaggcc
gagcgcgcgctgcgcgaacacctgcagggcctgacaccggtctacgtggccgagtaccgg
gtggacctggccggcgacggcgtgtggctgtgggcgcgggtgcgcggccgcgtggtcgac
tacgacgccgccggcaagccgcgccggctcgccggcaccgcgcgcgacatcacctcgcac
cgccaggccgacctggaacggcgcatcgccagcgaagtgctgcgcagcatgagcgaggcg
gtcgcggtgctggacgaagacctgcgcttcatctcggtcaatccggccttcacccgcatc
accggctacagcgaacgcgaggtgctgggccagccgatgaccctgctcgaccatgcgccc
gacgtgcccgccgcgccgtcgctcgagcacggccgctcctggcgcggcgatgcctggaaa
cggcgcaaggacggcctggaaatcctctgccacgtgcgccgcaacacggtcggcgacgcc
gacggccggcacagcttccacgtggtggtgctggaagacatcaccgaccagaagcgcgcc
gagcaggaactgcgctacctggccaactacgacacgctgaccagcctgcccaaccgcgca
ctgctgtccgagcggctggcgcgttcgatcgtgcgtgcgcggcgccagggcagttcggtg
gcggtgctgttcctggacctggaccggttcaaggacatcaacgattcgctcggccacgcg
gtcggcgaccgggtgctgcgcgcggtcgccgaacgcctgcagcaggcggtgggcccgcag
cacacggtcgcgcgcctggccggcgacgaattcaccgtggtggtggaggacatcgccgat
caggccgaggccgaagccgtcgccacgcgcgtgctggccgcgttcgatgcgccgctgcaa
ctggaggaccgccgcgaagtggcgatctcctcgtcgatcggcatctcgctgttcccgcag
cacgcattgctgcccagcgaactgctcaagcacgccgacaccgcgatgtaccaggccaag
gccgccgggcgccgcaacgtgcaggtctattcggcgcgcatggacgaggccacccgccac
cgcgccacgctggccagcagcctgcgcaagatcccgttcgaccaggagctgaagctggtc
taccagccgcgctattcgctgcgcgagcagcgcgtggtcggcgtggaagcgctgctgcgc
tggcacagcgccgatttcggcacggtctcgccgagccagttcatccccctggccgaagaa
accgggctgatcctggagatcggcgaatgggtgctgcgccaggcctgcagcacgctgcgc
gactggcgccagctgggcctgaccgacctgtgcatgtcggtcaacgtctcggcgatccag
ctcgagcgcggcgacctgccggcgttgatggcgcggatcctggccgagaccggggtcccg
gccgccaacgtcgagctggaactcaccgaaagcgtggtgatgtcgcaggtcggcaagaac
gccgccaccctgcatgcctgccgcgccctgggcctggccctggcgatcgacgacttcggc
accggctattcgtcgctggcctacctgaagcgcttgccgatcaataccttgaagatcgac
caggaattcatcggcgacctgacccgcgatccggacgacgaggcgatcaccagcaccatc
atcgcgatgggccactcgctgaccctgaaagtggtcgccgaaggcgtggagctgcccggc
cagctggcgttcctgcgccagcacggctgcgacgagatccagggccatctggtcgcgccg
gcactggaaccggacgcctgcctgcagttgctgcggcagccgctgctgctgcccgcctga
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