Xanthomonas sp. SS: HEP74_01040
Help
Entry
HEP74_01040 CDS
T09534
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xas
Xanthomonas sp. SS
Pathway
xas02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HEP74_01040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xas02022
]
HEP74_01040
02035 Bacterial motility proteins [BR:
xas02035
]
HEP74_01040
Two-component system [BR:
xas02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HEP74_01040
Bacterial motility proteins [BR:
xas02035
]
Pilus system
Twitching motility proteins
HEP74_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA_19
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QNH15916
LinkDB
All DBs
Position
complement(1252931..1254319)
Genome browser
AA seq
462 aa
AA seq
DB search
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIARHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDLHVLRGLVRHAL
ELNNNERAAPPAPPPEQASRLLGASAAMDVLRATIAKVARSQAPVYILGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADQAGLFQAAHGGTLFLD
EVAELPLPMQVKLLRAIQEKSVRPVGASIEVPTDVRILSATHKDLADLVADGRFRHDLYY
RINVIELRVPPLRDRGGDLPQLAAAILARLAKSHGRVTPLLSPSALDALNRYAFPGNVRE
LENILERALAMAEDDQISAADLHLPQPGNSARAAAEAAPALPPGVVDIDPTSSALPSYIE
QLERAAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgaagcgccctggtcgtcgacgacgaacgcgacatccgcgagctgctg
gtgctgaccctgggcaggatggggctgcgcatcagcaccgccgccaacctcgccgaagcc
cgcgaactgctggccagcaatccctacgacctgtgcatcaccgacatgcgcctgcccgac
ggcaatggcatcgaactggtcagcgagatcgcccgccactacccgcgcacgccggtggcg
atgatcaccgccttcggcagcatggacctggcggtggaagcgctgaaggcgggcgccttc
gacttcgtcagcaagccggtggacctgcacgtgctgcgcggcctggtcaggcacgcgctg
gagctcaacaacaacgaacgcgctgcgccgccggcgccgccgccggagcaggccagtcgc
ctgctcggcgcctcggcggcgatggacgtgctgcgcgccaccatcgccaaggtcgcgcgc
agccaggcgccggtctacatcctcggcgagtccggggtcggcaaggaactggtcgcgcgc
accatccacgaacagggcgcgcgcgcggccgggccgttcgtgccggtcaactgcggcgcg
atcccggccgaactgatggaaagcgagttcttcggccacaagaagggcagcttcaccggc
gcccatgccgaccaggccggcctgttccaggccgcgcacggcggcaccctgttcctcgac
gaagtggccgagctgccgctgccgatgcaggtcaagctgctgcgcgcgatccaggagaag
tcggtgcgcccggtcggtgcctcgatcgaagtgccgaccgacgtgcgcatcctctcggcc
acgcacaaggacctggccgacctggtcgccgacggccgcttccgccacgacctgtactac
cgcatcaacgtgatcgaactgcgcgtgccgccgctgcgcgaccgcggcggcgacctgccg
caactggccgcggcgatcctggcgcggctggccaagagccacggccgggtcactccgctg
ctgtcgccgtcggcactggacgcgctgaaccgctacgcgttccctggcaacgtgcgcgaa
ttggagaacatcctcgaacgcgccctggcgatggccgaagacgaccagatcagcgccgcc
gacctgcacctgccgcagcccggcaatagcgcccgcgccgcggccgaagccgctcccgcg
ctgccgcccggcgtggtcgacatcgacccgacctcctccgccctgccctcctacatcgag
caactcgagcgcgccgcgatccagaaggcgctggaagagaaccgctggaacaagacccgc
accgcggcccagctcggcatcacgtttcgtgcgctgcgctacaagctcaagaagttgggg
atggagtag
DBGET
integrated database retrieval system
