Xanthomonas sp. SS: HEP74_01130
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Entry
HEP74_01130 CDS
T09534
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xas
Xanthomonas sp. SS
Pathway
xas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP74_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xas03019
]
HEP74_01130
03400 DNA repair and recombination proteins [BR:
xas03400
]
HEP74_01130
Enzymes [BR:
xas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP74_01130
Messenger RNA biogenesis [BR:
xas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEP74_01130
DNA repair and recombination proteins [BR:
xas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEP74_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNH16005
LinkDB
All DBs
Position
complement(1367898..1369706)
Genome browser
AA seq
602 aa
AA seq
DB search
MQSSAHSVLGRVFGYDQFRGPQQDIVEHVAAGQDALVLMPTGGGKSLCYQIPSLLRDGTG
IVISPLIALMQDQVEALRQLGVRAEYLNSTLDGETAQRVERELLAGELDLLYVAPERLLT
PRFLSLLERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPPT
QREIAERLDLTQARHFVSSFDRPNIRYTVVQKDNSKRQLLDFLRVHRGSAGIVYCMSRRK
VEETAEFLAKEGLNALPYHAGLPAEVRAANQRRFLREDGIVMCATIAFGMGIDKPDVRFV
AHTDLPKSLEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEKGEAGEDRKRVERRK
LDQLLGYCESMQCRRQVLLAGFGETYPQPCGNCDNCLTPAAAWDATVAVQKALSCVYRSG
QRFGVGHLIDILRGSDGEKIKQFGHDQLSTYGIGKDLDARAWRGVFRQLVATGLLEVDSD
AYGGLRLTDASRQVLKGERQIMMRREAPSRGRERGDRSGSPRTGVPVQPQDLSLFNALRD
LRAGLAKEQNVPAFVIFHDSTLRNIAEQRPTSLDELAHVGGIGGTKLARYGQQLVDIVLQ
QG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttccgcccattccgtactcggccgcgtgttcggctacgaccagttccgcggt
ccacagcaggacatcgtcgaacacgtcgctgccggccaggacgcgctggtgctgatgccc
accggcggcggcaagtcgctgtgctaccagatcccctcgctgctgcgcgacggcaccggc
atcgtcatctcgccgctgatcgcgctgatgcaggaccaggtcgaagcgctgcgccagctc
ggcgtgcgcgccgaatacctcaattccacgctggacggcgaaaccgcgcagcgggtcgag
cgcgagctgctggccggcgagctggacctgctgtacgtcgctcccgaacgcctgctgacc
ccgcgcttcctgtcgctgctcgaacgcagccgcatcgccctgttcgcgatcgacgaggcg
cactgcgtgtcgcaatggggccacgatttccgccccgagtaccggcagctcaccgtgctg
cacgagcgctggccgcagatcccgcgcatcgccctgaccgccaccgccgatccgccgacc
cagcgcgagatcgccgaacgcctggacctgacccaggcgcgccactttgtcagctccttc
gaccgtcccaacatccgctacaccgtggtgcagaaggacaacagcaagcgccagttgctg
gatttcctgcgcgtgcaccgcggcagcgccggcatcgtctactgcatgtcgcggcgcaag
gtcgaggagaccgccgagttcctggccaaggaaggactcaacgccctgccctaccacgcc
ggcctgccggccgaggtgcgtgccgccaaccagcgccgcttcctgcgcgaggacggcatc
gtgatgtgcgccaccatcgccttcggcatgggcatcgacaagccggacgtgcgcttcgtc
gcgcataccgatctgcccaagtcgctggaaggctactaccaggaaaccggccgcgccggg
cgcgacggcgaagccgccgaggcctggctgtgctacggcctgggcgacgtggtgctgctc
aagcagatgatcgaaaagggcgaagccggcgaagaccgcaagcgggtggagcggcgcaag
ctcgaccagttgctgggctattgcgaatcgatgcaatgccgccgccaggtgctgctggcc
ggcttcggcgagacctatccgcagccctgcggcaactgcgacaactgcctgaccccggcc
gcggcctgggacgccaccgtggccgtgcagaaggcgctgagctgcgtctaccgcagcggc
cagcgcttcggcgtcggccacctgatcgacatcctgcgcggcagcgacggcgagaagatc
aagcagttcggccacgaccagctcagcacctacggcatcggcaaggacctggacgcgcgc
gcctggcgcggcgtgttccggcagctggtcgccaccgggctgctggaagtggacagcgac
gcctacggcgggctgcgcctgaccgacgccagccgccaggtgctcaagggcgaacgccag
atcatgatgcgccgcgaggcgcccagccgcggccgcgaacgcggcgaccgcagcggcagc
ccgcgcaccggcgtgccggtgcagccgcaggacctgagcctgttcaacgcgctgcgcgac
ctgcgcgccggcctggccaaggagcagaacgtgccggcgttcgtgatcttccacgacagc
accctgcgcaatatcgccgaacagcgcccgaccagcctggacgaactggcccatgtcggc
ggcatcggcggcaccaaactggcccgctacggccagcagttggtcgatatcgtgctgcag
cagggctag
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