Xanthomonas sp. SS: HEP74_01357
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Entry
HEP74_01357 CDS
T09534
Name
(GenBank) RHS Repeat protein
Organism
xas
Xanthomonas sp. SS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Big_5
CarboxypepD_reg
Kelch_4
DUF4595
Kelch_KLHDC2_KLHL20_DRC7
RHS
CarbopepD_reg_2
TTR_TEN1-4
Tox-URI2
CooC_C
Motif
Other DBs
NCBI-ProteinID:
QNH16232
LinkDB
All DBs
Position
1651977..1657427
Genome browser
AA seq
1816 aa
AA seq
DB search
MKNGIYKVQAVSRMRSKVFVVGMLLGALSMVGSLWHLEVGLLPAAQASAAESALGDVMQP
LAALAQRVQLKDGRWLQLNAAGTQLRKEGAGATPSDKALDLPEVRINPSLTLLPSGRVLI
WGGTDGHGTLRRDGLWYDPTLDALSVANDLTLSPRAGHTATVLTDGSVLFAGGDTASAGM
PAELWDERRNRALALADETSIARRGHTALLQSDGQVRIAGGVDRHGTRQETDLVYSQNGG
RFSNALSQQDHLPAGLAGSIPAQGAKDVLPSQRLSVRFAQPVNMADFSTSSVTLIGPGGT
TPIEVMPAEGGRLLFVSPKRSLFPASHYTLMVDGVRTREGKPQPLVAIDFSTAALDAAGS
ATETADTATEPESERVTTGDARHRSGCDQTGSAAQPCRAHGFVDNGIWYPGRDNTDSRWR
IYSDEKRVELAGYSAIMAARYKLTALRGRVVRVDQMPVANVEVSIGSITTRTNADGWFAL
FDLPQGHQELYVDGSTANVGADQYGQFVVGVDIKPGRLNELPYLMHLPKISARDKVRIAS
PLKQDLVIGHPDIPGLELHIPKGTVIHDRKGRLVNEIAIVPTPVNRAPFPVMENHPMAFT
VEPGASQVRGLDPDARNGIRVYYPNYDNYRKGTEADFWIYDPTDGWRVYGRGTVSKDGRH
FVPEQGVALHETMGGMYSVPGGNGASEPNLAADNSGQCGCSGDAAVAGDPVDLKTGEFTH
AETDLSIDDIVPITVGRNYRPNDLKRGVFGIGMSWNWGYTLNRPSTANYDVLELVQPNGS
SLRFDRISGTGNQGEWRQAGSNTRFAGALIKTVYDSDPTQPWGRAFLLTLRDGSRMQFSS
WNDIRVRWIEDRHGNRTSLLYNAGLISEIISPSGRSVAIAYDGSNRIKTLRDHTGREWSY
SYDSNGLLSKATYPDATFRQYTFQTRVQNGAMAQHRIESITNQRGHRLLLNRFETVNGVS
TGRVIKQTQADGGEISIDYAHVDNGVTGTLVTEVDGSKRRIVFADGTPYPVSETLAYGTA
EAQTFTYERNSNGQLIRSTDPLGRKTEYSYNADGQTTQIIAMAGTAKARTLSMTYNADGD
LTSITDPLNRVTRLGYQNRCLSSVTDTLNRTALYRCNAAGQMISATDPLQRTLQLHYDGF
DLVGVTDTLGRRTNYRIDSLGRVVATEDPQGNVVRREYDVMGRVKKLVDAHGMALEYGFD
ANGNVAAVLLPNGNGITYTYDSRDRPLTRTDATGKGEQWTYDLADRVTSHIDRLQRAVVN
TYDVLGRPKTTTFQDGTKATYTYDAGNRLRALTDTGAVGTLSWDYDDFDAVIAESGPQGT
VGYAYDGVGRRKEMRAGAQAQVIYTYDDGDRLRQLDQGMERVQFDYDDVDRLGTLTLPNG
VEAVHGYDEGNQLTSLAWQKPSKPAIGTLSFDYDRNGQVVSQSGSFASQVLPAATTSTSS
FDDANRQLTHNGRTLTYDDNGNLIGDGVRSYVWNVRNQLVEIREGTSTIAAFGYDPLGRR
VARTEGGVATQYLYDGQNAVQEAVGNNANPILTGLGVDQRFARNGAGGRTYYLTDHLGST
RGLTNASGDLLERYDYTPYGQLQNAPSGSTNPYRYTGREEDESGLYYYRARYYSPEMGRF
ISEDSYGFASGDANFYAYALGNPISYNDPSGHIAWFVLVPLIWGGIEVAISLYDAYDTGR
TLLDPCETTEAKVIAAVGFGVGLFAPGGGYGSGSKKVYQYALRAKADGWYPVMTRGSKSP
TSQVWLSEGEVWKFGTTQNPNKRYPKQYLQGIGTGGVDMVKEFDGTRSQALMLEQMKIDN
FHFQNGQLPPGNKVRR
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatggaatctacaaggtacaggcagtcagccgcatgcgctccaaggtcttcgtg
gtggggatgctgctgggagcgctgtcgatggtcggctcgctgtggcatctggaagtgggt
ttgctgcccgctgctcaggccagcgcggcggaaagcgccctgggcgacgttatgcagccg
ttggcggcactagcgcaacgcgtgcagctgaaggatggtcgctggctgcaactgaacgcc
gccggcacgcagcttcgaaaagagggggcgggtgcaactccgtcggacaaagcgctggat
ctgccggaagttcgcatcaaccccagcttgacgctactgccgagtggtcgcgtgttgatc
tggggcggtaccgacggtcacggtaccttgcgacgcgatgggctctggtatgaccctacg
ctggacgcgctttcagttgccaacgacctgacgctgtctccgcgtgcaggccacaccgca
acggtgctgacggacggtagtgtactgttcgccggcggcgacaccgcgtcggcaggcatg
cctgccgagctttgggatgaacgcaggaaccgcgcgttggcgcttgccgacgagaccagc
atcgcgcgccgtggtcatacggcgctgctgcagagtgacgggcaggtgcgcattgccggt
ggcgtcgatcgccacggaacacgtcaggaaacagatctggtctacagccagaacggcggg
cgattctccaatgcactgtcgcagcaagaccatcttccagccggactggctggctcgatc
ccggcccagggagccaaggacgtgctgccgtcccagcgtttgtcggtacgcttcgcgcaa
cccgtcaacatggccgatttttccacgtcgtcggtcaccttgatcggccccggcggcact
acccccatcgaggtcatgccggccgaaggcggccggctgctgttcgtctcgccgaaacgg
tcgctgttccccgcctcccactacaccctcatggttgacggtgtgcgtacccgggaagga
aagccacagccgctggtggcgatcgacttcagcaccgccgcccttgacgccgctggaagc
gccaccgagaccgcagatactgcaacagagccggagagtgagcgagtcaccaccggggat
gcgcgtcatcggagtggctgcgatcagacgggaagcgccgctcagccctgtcgcgcgcac
ggctttgtcgacaatggcatctggtaccccggccgtgacaacaccgatagtcggtggcgc
atctacagcgatgagaagcgcgtcgagttggccggatactcggccatcatggccgcgcgc
tacaaactgaccgcgctgcgcggccgcgtggtccgcgtggaccagatgccggtcgccaat
gtcgaggtcagcatcggcagcatcacgacccgaaccaatgccgacggctggttcgccctg
ttcgacttgccccagggccatcaggagctgtacgtcgacggcagcaccgccaatgtcggc
gctgaccagtatgggcagttcgtggtcggcgtggacatcaagcccggtcgcctcaacgaa
ttgccgtacctgatgcacctgcccaagatcagcgctcgggacaaggtgcgcatcgcctcc
ccgctgaagcaggacctggtcatcggccatccggacatcccggggctggagctgcacata
cccaaaggcacggtcattcatgaccgcaaggggcgactggtcaacgagatcgcgatcgtg
ccgacgccggtcaacagggcgccattcccggtgatggaaaaccatcccatggcgttcacg
gtcgagcccggtgcatctcaggtgcgcgggctggatcccgacgcgcgcaatggcatccgt
gtctactacccgaactacgacaattacaggaagggaaccgaagccgacttctggatttac
gatccaaccgatggctggcgggtgtacgggcgcggcacggtttccaaggacggacgccat
ttcgtgccggaacagggcgtcgccctgcacgaaaccatgggcggcatgtacagcgttcct
gggggaaatggcgcaagcgagcccaacctggccgcggacaactccgggcaatgcggctgc
agcggcgatgctgccgtcgccggcgatccggtcgacctgaagaccggcgagttcacccac
gccgagaccgacctctccatcgacgatatcgtgcccattaccgtggggcgcaattatcgg
cccaacgatctcaagcgcggcgtcttcggcattggcatgtcgtggaattggggctacacc
ctcaatcgccccagtaccgccaactacgacgtcctggaactggtgcagcccaatggctca
tcgttgcggttcgacaggatttccggcaccggcaaccagggcgagtggcggcaggccggc
tccaatacccgcttcgccggcgcgttgatcaagaccgtctacgactcggatccgacccag
ccctgggggcgagcgttcctgctcaccctgcgtgacggttcccggatgcagttctccagt
tggaacgacatccgcgtgcgctggatcgaggatcgtcacggcaaccgcacgtcgctgctc
tacaacgcaggcctgatatcggagatcatctcgcccagcggccgctccgtcgccatcgcc
tacgacggcagcaatcgcatcaagacactgcgcgaccatactggccgcgagtggtcgtac
agctacgacagcaacggcctgctctcgaaggcaacgtatccggatgcgacgttccgccag
tacacgttccagacgcgtgttcagaacggagccatggctcagcaccgcatcgagtcgatc
acgaatcagcgcgggcatcgcctgctgctcaaccgcttcgagacggtcaatggcgtttcg
accgggcgggtgatcaagcagacccaggccgatggcggcgagatcagcatcgactacgcc
cacgtcgacaacggggtgaccggcacgctggttaccgaggttgatggcagcaagcgcagg
attgtattcgccgatggcaccccttacccggtctcggagacactggcgtatgggactgcg
gaagcgcagaccttcacctacgagcgcaacagcaacggccagctgattcgcagcaccgac
ccgctgggacgaaagaccgagtacagctacaacgcggacggccagaccacacagatcata
gcgatggcgggcacagcgaaggcccggaccctcagcatgacgtacaacgccgatggcgac
ctgacgtccatcaccgacccgctgaacagggtcacgcggctgggctaccagaaccgctgc
ctgagttcggtgaccgatacgctcaatcgcaccgcgctctatcgctgcaacgccgctggc
cagatgatcagcgccaccgatccactgcaacggacactacagctccactacgacggattc
gacttggtcggggttaccgataccctggggcgtcgcaccaactatcgcatcgattccctg
ggacgcgtggtcgcaacagaagacccgcagggcaacgtcgtccgccgcgagtacgacgtg
atggggcgggtcaagaagctggtcgacgcgcatggcatggcattggagtacggcttcgat
gccaacggcaatgtcgccgctgtgttgctgcccaacggcaatgggatcacctacacctac
gatagccgcgaccgtcctttgacccgtaccgatgcgactggaaagggcgagcagtggacg
tacgacctggctgatcgcgtcaccagccacatcgacaggctgcagcgcgctgtcgtcaac
acatacgacgtgttgggacgaccgaagaccaccaccttccaggatggcaccaaggccacc
tatacatatgacgccggcaatcgcctgcgtgcgcttacggacactggcgcggtaggcaca
ctgagctgggactacgacgacttcgatgcggtcattgccgaatccggcccgcagggaacc
gtcgggtacgcctacgacggtgtcggccgtcgcaaggaaatgcgtgcaggtgcgcaggcc
caagtcatctatacctatgacgatggcgaccgcctgcggcagctggaccaagggatggag
agggtccagttcgactacgacgatgtcgaccgtctggggaccttgacgctgcccaatggc
gtcgaggccgtacacggctacgatgaaggcaaccagctgaccagcctggcctggcagaag
cccagcaagccggcgatcggtaccttgagcttcgactatgaccgcaacggacaggtcgtc
agccagagcggcagctttgccagccaggtcttgcccgcggcaacaacgagcacaagcagc
ttcgacgacgccaatcgtcagctgacgcacaacggtcgcacgctgacctacgacgacaac
ggcaacctcatcggcgatggggtgcgcagctatgtctggaacgtccgcaaccagttggtg
gagatccgtgaagggaccagcaccatcgctgcattcggctatgacccgctcggccggcga
gtcgcacggaccgaaggaggcgttgccacccagtacctgtacgacgggcagaacgcggtg
caggaagcggtcggcaacaacgccaatccgatcctgaccggactcggcgtcgatcaacgt
tttgctcgcaacggcgcgggcggtcgaacctactacctgaccgaccatctgggcagcacg
cgcgggctgaccaacgcgtccggcgatcttctcgagcgctacgactacaccccctacggg
caattgcagaacgcaccaagtggctccaccaacccgtatcgctataccggcagagaggag
gacgaaagcgggctctactactatcgggcgcgctactacagcccggaaatgggccgcttc
atcagcgaggactcctacggcttcgcctccggcgatgcgaacttctacgcctacgcactg
ggcaacccgatcagctacaacgatccttcggggcatattgcttggtttgtattggttcca
ctgatttggggcggaattgaagtcgcaatttccctgtacgacgcatatgacacagggaga
acgctgctcgatccctgcgaaaccaccgaagccaaggtgatcgctgctgttggattcggt
gtgggccttttcgcaccagggggcggttacggctcgggctcaaagaaggtctatcaatat
gcgcttcgagcaaaagcagatggctggtatcctgttatgaccaggggaagtaagagccca
acttcgcaagtctggctatccgaaggtgaagtgtggaaatttggtacgactcagaatccg
aataaaaggtatcctaagcaatatctgcaaggcattggaaccggtggtgtcgatatggtg
aaggagtttgacgggactaggtcccaggcgctaatgcttgagcaaatgaagatcgataac
ttccattttcagaatggccaactcccgccaggaaataaggttagaaggtag
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integrated database retrieval system
