Xanthomonas sp. SS: HEP74_01380
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Entry
HEP74_01380 CDS
T09534
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
xas
Xanthomonas sp. SS
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xas03000
]
HEP74_01380
Transcription factors [BR:
xas03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HEP74_01380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_23
HTH_38
HTH_Crp_2
MarR_2
MarR
Sigma70_r4_2
HTH_24
HTH_5
AIRS
HTH_AsnC-type
HTH_10
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QNH16255
LinkDB
All DBs
Position
1745967..1746971
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AA seq
334 aa
AA seq
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MATIYDIAKHVGVSAGTVSRALSRPEKVLPATRTRIEQAAAALGYVPNTVARTLKTQRSG
KILVTVPDIANPFFAQILQGAEEAAQAVGYAVLLGDTQHQPDREERYAQMLRRNEADGLI
VLGHRLPPTAREIVKQLGTAAPVVNGCEFDPALGIPSVHIDNAAAARAVMEHLYGLGHER
IAVVGGPPDNPLHQQRLEGTRAAGKARGRLRNLSVVPGDFSVESGHAAAMALLARAPVPT
AIFCFSDQMALGALAACRDLGLRVPDDLSIVGFDDLASSSYLTPPLTTIRQPMREIGIRA
VNLLLAIIENVDVPLQQTLDFRLMLRGSTAAPRE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatttacgacatcgcaaagcacgtcggcgtctccgccggcacggtgtcgcgc
gcgctttcgcggccggaaaaagtcctgccggccacgcgcacgcgcatcgagcaggccgcc
gccgcgctgggctatgtccccaacacggtcgccaggacgctcaagacccagcgcagcggc
aagatcctggtcaccgtgccggacatcgccaatccattcttcgcgcagatcctgcagggc
gcggaggaagcggcgcaggccgtcggctatgcggtcctgctgggcgatacccagcaccag
cccgaccgcgaggagcgctacgctcagatgctccggcgcaacgaagcggacgggctgatc
gtgctggggcaccgcctcccgccgacggcgcgcgagatcgtcaagcagttgggcaccgcc
gcgccggtggtcaacggctgcgagttcgacccggcgctgggcatccccagcgtccacatc
gacaacgcggccgccgcgcgcgcggtgatggaacacctgtacggactggggcacgagcgg
atcgccgtggtgggcggcccacccgacaaccccttgcaccagcagcgactggaagggacc
cgcgccgccggcaaggcgcgcggccgcctgcgcaacctgagcgtggtgccgggcgatttc
tccgtggaatccgggcatgcggcagcgatggcgctcttggcccgcgcgccggtgccgacc
gcgatcttctgcttcagcgaccagatggcgctgggcgccctggcggcctgccgggacctg
ggcttgcgcgtgccggacgacctttccatcgtcggcttcgacgacctggcgtcatccagc
tacctcacgccgccattgacgaccatccgccaacccatgcgcgagatcggtatccgcgca
gtcaacctgctgctcgccatcatcgaaaatgtagacgtaccgcttcagcagacgctggat
ttccggttgatgttgcgcgggtcgactgctgcgccgagggagtag
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