Xanthomonas sp. SS: HEP74_01453
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Entry
HEP74_01453 CDS
T09534
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xas
Xanthomonas sp. SS
Pathway
xas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP74_01453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xas03000
]
HEP74_01453
03400 DNA repair and recombination proteins [BR:
xas03400
]
HEP74_01453
Enzymes [BR:
xas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HEP74_01453
Transcription factors [BR:
xas03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HEP74_01453
DNA repair and recombination proteins [BR:
xas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEP74_01453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QNH16328
LinkDB
All DBs
Position
complement(1841515..1842990)
Genome browser
AA seq
491 aa
AA seq
DB search
MPHITLDDHDLYDRARQSRDARFDGVFFTAVRSTGIYCRPVCPAPAPKRSNVRYYPSAAA
AAAAGYRPCLRCRPELSPEAQQHLGEESVQRALALIAEGALQDASVERLAAEVGLSARQL
QRVFVAQLGATPAAVHATRRLLLAKQLLTETALPITQVALAAGFNSLRRFNTAFLEGCGM
PPSAIRKQRAEVPGGDLLLRLGYRPPLDFAAMLAFLRKRAIPGIERIGEASYERVLGPLD
ASTRIRVEADPQRHELRLQIAAADPRAIPDIVRRVRRIFDLDADLRAVHATLGAEPLLAR
AIARRPGLRVPGGWDGFEVAVRAVLGQQVSVAGAATLAARLVERHGAYRPGQAPGLDRAF
PAPQDLLDAPLEAIGLPRSRAATIRALAAAVVDGRLQFRAGQRLSEFVERATALPGIGAW
TAHYIALRALGQPDAFPAGDLVLQRMLGADGARLSERATDARAQAWRPWRAYAVLHLWHL
AGDPPEETPHD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacatcacgctcgacgaccacgacctctacgaccgcgcccgccagtcccgcgat
gcgcgcttcgacggggtgttcttcaccgccgtgcgcagcaccggcatctactgccggccg
gtgtgcccggcaccggcgcccaagcgcagcaacgtgcgctactaccccagtgccgccgcc
gcggccgcggccggctaccgcccctgcctgcgctgccggccggaactgtcgccggaagcg
caacagcacctgggcgaggaatcggtgcagcgtgcgctggcgctgatcgccgagggcgcg
ctgcaggacgccagcgtcgaacggctcgccgccgaggtcggactcagcgcgcgccagttg
cagcgcgtgttcgtcgcccagctcggcgccaccccggcagcggtgcatgcgacgcgacgc
ctgctgctggccaagcaattgctgaccgagaccgcgctgccgatcacccaggtggcgttg
gcagccggtttcaacagcctgaggcgcttcaacaccgcgttcctggagggctgcgggatg
ccgccgtcggcgatccgcaaacagcgcgccgaggtgcccggcggcgatctgctgctgcgc
ctgggctaccgcccgccgctggatttcgcggccatgttggcattcctgcgcaagcgcgcg
atccccggcatcgagcgcatcggcgaggccagctacgagcgcgtgctcggcccactcgat
gcctccaccaggatccgcgtcgaggccgatccgcagcgccacgaattgcgcctgcagatc
gccgcggccgatccgcgcgcgatccccgacatcgtgcggcgggtgcgccgcatcttcgac
ctggacgccgacctgcgcgcggtgcacgccacgctcggcgccgaaccgctgctggcgcgc
gcgatcgcgcggcgtccgggactgcgcgtgcccggcggctgggacggcttcgaagtggcg
gtgcgcgcggtgctcggccagcaggtcagcgtggccggcgcggcgaccctggccgcgcgc
ctggtcgagcgccacggcgcgtatcgaccgggccaggcgcccggcctggaccgcgcgttc
ccggcgccgcaggacctgctggacgcgccgctggaggcgatcggcctgccgcgctcgcgc
gccgccacgatccgcgcgctggccgcggcggtggtggacggacgcctgcagttccgcgcc
ggccagcgcctgtccgagttcgtcgaacgcgccaccgccctgcccggcatcggcgcctgg
accgcgcactacatcgcgctgcgcgcgctcggccagcccgatgcgttcccggccggcgac
ctggtcctgcaacgcatgctcggcgccgacggcgcgcgcctgagcgaacgcgccaccgac
gcccgcgcgcaggcctggcggccatggcgcgcctatgccgtgctgcacctgtggcacctg
gccggcgatccacccgaggagactccccatgactga
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