Xanthomonas sp. SS: HEP74_01499
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Entry
HEP74_01499 CDS
T09534
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xas
Xanthomonas sp. SS
Pathway
xas03030
DNA replication
xas03430
Mismatch repair
xas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP74_01499 (dnaE)
03430 Mismatch repair
HEP74_01499 (dnaE)
03440 Homologous recombination
HEP74_01499 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xas03032
]
HEP74_01499 (dnaE)
03400 DNA repair and recombination proteins [BR:
xas03400
]
HEP74_01499 (dnaE)
Enzymes [BR:
xas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP74_01499 (dnaE)
DNA replication proteins [BR:
xas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEP74_01499 (dnaE)
DNA repair and recombination proteins [BR:
xas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEP74_01499 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QNH16374
LinkDB
All DBs
Position
complement(1885329..1888919)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSTSRFAHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELELPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADLMIADSAAETPWRLTVLCRNRDGYLSLSRLLTRAWLE
GQRNEGGVAIRPEWLQTGSDNLFALAGRDSLAGRLASEGRHDLAEQQLADWQRIFGDGLH
LELTRTGRDGEEAFNQFALHAAGTRGLPVVASNDVRFLYASDFAAHEARVCISSGRVLDD
PKRPRDYSDQQYLKSSEEMAALFADIPDALDNTLALAQRCNIEMQLGTYFLPAYPVPDNE
TLDSWIRSQSRDGLAARLEKNPLAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQ
WGKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMD
RRDEVIDYVARKYGRDRVSQIITYGTMAAKAVVRDCGRVLGFPYGLVDGVAKLIPNILGI
TLKDAMGEGKDSEMASPELIQRYQSEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPTPL
SDFCPLFAEHDVDNLGKNPVTQFDKDDVEQVGLVKFDFLGLRTLTIIDWAVKAINVRHAR
AGIPPVDITALPLDDAPTYKGIFASGNTGAVFQFESSGMRRLLKDAKPDRFEDLIALVSL
YRPGPMDLIPDFNARKHGQQEIIYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGAYSLGG
ADLLRRAMGKKVPAEMAKHREIFREGAAKGGVGEAKADEIFDLMEKFAGYGFNKSHAAAY
ALVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVLPPRLNASAYMFE
AATPDTIQYGLGAIKGVGRGACEAIVAERERGGEYASLLDFCTRVESAKLNKRTLEALIN
AGAMDGLGSNRATLMLQLPEVMKATEQMARERASGQNSLFGGADTSAPALHLDLSESKEW
PLGQLLTGERETLGFYLSGHPFDPYREEVRELVGCDLSALEKICAQFGGGRGGGGDGEKR
AWRPETSAILAGQVVGVRRKGDSQVFVQLEDGRGRVECSAFTDAIAEFGHLLTRDRILIV
KGGVREDEFNGGYAMRIRQCWDYEQICTHHAQRLSLRLDLRQRSTWQRIDALLARHRPGK
TPLRLDLLLQSEHGAVAGMLDLNGNHAVRVDPQLLDTLRADPGVRAVKVKYNPPWA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgctcatctgcacgtccacaccgagttctcgctggcggattcg
accatccgtgtgcccgagaaaccggatcaggccgacccgaagaaagccaagcaggccaac
ctgctcagccgtgcggtcgaactggagttgcccgcgctcgcggtcaccgacctgaacaac
ctgttcgcgctggtcaagttctacaaggccgccgaaggcgtgggcatcaagccgatcgcc
ggcgccgacctgatgatcgccgacagcgccgccgagacgccgtggcggcttaccgtgctg
tgccgcaaccgcgacggctacctgagcctgtcgcgcctgctgacccgtgcctggctggaa
ggccaacgcaacgaaggcggcgtggcgatccgcccggagtggctgcagaccggcagcgac
aacctgttcgcgctggccgggcgcgacagcctggccgggcgcctggccagcgaaggtcgc
cacgacctggccgagcagcaactggccgactggcaacgcatcttcggcgacggcctgcac
ctggaactgacccgcaccggccgcgacggcgaggaagcgttcaaccagttcgcgctgcac
gccgccggcacccgcggcctgccggtggtggccagcaacgacgtgcgcttcctgtacgcc
agcgacttcgccgcgcacgaagcgcgcgtgtgcatttcctccggccgcgtgctcgacgat
cccaagcgcccgcgcgactacagcgaccagcaatacctgaagtcgtcggaggaaatggcc
gcgctgttcgccgacattcccgacgcgctcgacaacaccctggcgctggcgcagcgctgc
aacatcgagatgcagctgggcacctatttcctgcccgcgtatccggtgcccgacaacgag
accctggacagctggatccgcagccagtcgcgcgacggcctggccgcgcgcctggagaag
aatccgctggcgccgggcaagacccgccaggactacgtcgaccggctcgagttcgagctg
gacacgatcatcaagatgggcttccccggctacttcctgatcgtggccgacttcattcag
tggggcaagaaccagggcatcccgatcggcccgggccgcggctccggcgccggctcgctg
gtggcgtgggcgctgcagatcaccgacctggatccgctgccgtacaacctgctgttcgag
cgcttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggac
cgccgcgacgaggtcatcgactacgtcgcgcgcaagtacgggcgcgaccgggtcagccag
atcatcacctacggcaccatggcggccaaggcggtggtgcgcgactgcggccgcgtgctc
ggcttcccgtacggcctggtcgacggcgtggccaagctgatccccaacatcctcggcatc
acgctgaaggacgcgatgggcgaaggcaaggacagcgagatggcctcgccggagctgatc
cagcgctaccagagcgaggacgacgtccgcgacctgatggatctggcgcggcagctggag
gacctgacccgcaacgccggcaagcacgccggcggcgtggtcatcgcgccgacgccgctg
tccgacttctgcccgctgttcgccgaacacgacgtcgacaacctgggcaagaacccggtc
acccagttcgacaaggacgacgtcgagcaggtcggcctggtcaagttcgacttcctcggc
ctgcgcacgctgaccatcatcgactgggcggtgaaggcgatcaacgtgcgccatgcgcgc
gccggcatcccgccggtggacatcaccgcgctcccgctcgacgacgcgcccacctacaag
ggcatcttcgcctcgggcaacaccggcgcggtgttccagttcgaatcctcgggcatgcgc
cggctgctgaaggatgccaagcccgaccgcttcgaagacctgatcgcgctggtgtcgctg
taccgccccggcccgatggacctgatcccggacttcaacgcgcgcaagcacggccagcag
gaaatcatctaccccgatccgcgcaccgaagcgatcctgaaagacacctacggcatcatg
gtgtaccaggagcaggtgatgcagatggcgcagatcgtcggcgcctactcgctgggcggc
gccgacctgttgcgccgcgcgatgggcaagaaagtgccggcggagatggccaagcaccgc
gagatcttccgcgagggcgcggccaagggcggcgtcggcgaggccaaggccgacgaaatc
ttcgacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctac
gcgctggtcagctatcagaccgcgtggctgaagcggcactacccggccgagttcatggcc
gcgacgctgtcctcggacatggacaacaccgacaaggtggtcggcttcctcgacgaggtg
cgcaacctcggcctgacagtgctgccgccgcggctcaacgcctcggcgtacatgttcgaa
gcggccacgccggacaccatccagtacggcctgggcgcgatcaagggcgtgggccgcggc
gcctgcgaggcgatcgtggccgagcgcgagcgcggcggcgaatacgcctcgctgctggat
ttctgcacccgcgtggaatcggccaagctcaacaagcgcaccctggaagcgctgatcaac
gccggcgcgatggacgggctgggcagcaaccgcgccacgctgatgttgcagctgccggag
gtgatgaaggccaccgagcagatggcgcgcgagcgcgcctccgggcagaactcgctgttc
ggcggcgccgacaccagcgccccggcgctgcacctggatctgtcggaaagcaaggaatgg
ccgctgggccagttgctgaccggcgagcgcgagacgctgggcttctacctcagcggccat
ccgttcgatccctaccgcgaggaagtgcgcgagctggtcggctgcgacctgagcgcgctg
gaaaagatctgcgcgcaattcggcggcgggcgcggcggtggcggcgacggcgaaaaacgc
gcctggcgcccggaaaccagcgcgatcctcgccggccaggtggtcggcgtgcggcgcaag
ggcgacagccaggtgttcgtgcaactcgaggacggccgcggccgggtcgagtgcagcgcg
ttcaccgacgccatcgccgagttcggccacctgctcacccgcgaccgcatcctgatcgtc
aagggcggcgtgcgcgaggacgaattcaacggcggctatgcgatgcgcatccgccagtgc
tgggactacgaacagatctgcacccaccacgcgcagcgcctgtcgctgcgcctggatctg
cgccagcgcagcacctggcagcgcatcgacgcgctgctggcgcgccaccgccccggcaag
acgccgctgcgcctggacctgctgctgcaatccgaacacggcgccgtcgccggcatgctc
gacctcaacggcaaccacgcggtgcgcgtggacccgcaactgctggacaccctgcgcgcc
gatccgggcgtgcgcgcggtgaaggtcaagtacaacccgccgtgggcttga
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integrated database retrieval system
