Xanthomonas sp. SS: HEP74_01870
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Entry
HEP74_01870 CDS
T09534
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xas
Xanthomonas sp. SS
Pathway
xas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HEP74_01870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xas03400
]
HEP74_01870
Enzymes [BR:
xas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HEP74_01870
DNA repair and recombination proteins [BR:
xas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HEP74_01870
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEP74_01870
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEP74_01870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QNH16736
LinkDB
All DBs
Position
complement(2312344..2313783)
Genome browser
AA seq
479 aa
AA seq
DB search
MPDSFLFYDLETFGADPRRTRIAQFAAVRTDAALNVVEEPVSFFVQPADDLLPSPIATLI
TGITPQQALRDGVNEADAFARIAEQMARPQTCTLGYNSLRFDDEFVRHGLFRNFHDPYER
EWRGGNSRWDLLDMLRLMHALRPDGVVWPQRDDGATSFKLEQLALANGVRDGDAHEALSD
VYATIGMARLFRERQPRLWDYALKLRDKRFCGGLLDVVAMQPVLHVSMRYPAARLCAAPV
LPLARHPRIDSRVLVFDLEGDIEPLLRYTPEQIADRLYTPQADLPEGEQRIPLKEVHLNK
APALVAWSHLRDRDFARLQLDPAQILAKAARLREAGPELAEKVRRVFGNERASAPADVDA
SLYDGFLADTDKRAMAQVRATPPAQLAPLESGFRDPRLPELLFRYRARNWPQTLSIVEQS
RWDDYRRQRLHGDSGLAELGFDGYYAQLADLRLAHPDDATKQALLDQLAAWGQDLQRTL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacagctttctcttctacgacctggaaaccttcggtgccgatccgcggcgcacg
cgcatcgcccagttcgcggcggtgcgcaccgatgcggcgctgaacgtggtcgaggagccg
gtcagcttcttcgtgcagccggccgacgacctgctgccctcgccgatcgccacgctgatc
accggcatcaccccgcagcaggcgctgcgcgacggggtcaacgaggccgatgcgttcgcg
cgcatcgccgagcagatggcgcggccgcagacctgcacgctgggctacaactcgctgcgc
ttcgacgacgagttcgtgcgccacggcctgttccgcaacttccacgatccgtacgaacgc
gagtggcgcggcggcaattcgcgctgggacctgctggacatgctgcggctgatgcacgcg
ctgcgcccggacggagtggtctggccgcagcgcgacgacggcgccacctcgttcaagctg
gagcagctggcgctggccaacggcgtgcgcgacggcgacgcgcacgaggcgctgtccgac
gtctacgccaccatcggcatggcgcggctgttccgcgagcggcaaccgcggctgtgggac
tacgcgctgaaactgcgcgacaagcgcttctgcggcggcctgctcgacgtggtggcgatg
cagccggtgctgcacgtatcgatgcgctatccggccgcacgcctgtgcgcggcgccggtg
ctgccgctggcgcggcatccgcgcatcgacagccgggtgctggtgttcgacctggaaggc
gatatcgagccgctgctgcgctacaccccggagcagatcgccgaccgcctgtacacgccg
caggccgacctgcccgagggcgagcagcgcattccgttgaaggaagtgcacctgaacaag
gcgccggcgctggtcgcctggtcgcatctgcgcgatcgggatttcgcccgcctgcagctc
gacccggcgcagatcctggccaaggccgcgcgcctgcgcgaggccgggccggagttggcc
gaaaaggttcgccgcgtgttcggcaacgagcgcgcatcggccccggccgacgtggacgcc
tcgctgtacgacggcttcctggccgacaccgacaagcgcgcgatggcgcaggtgcgggcg
accccgccggcacagctggcgccgctggaatcgggcttccgagatccgcgcctgcccgag
ctgctgttccgctaccgcgcgcgcaactggccgcagacgctgtccatcgttgagcagagc
cgctgggacgactaccggcgccagcgcctgcacggcgacagcggcctggcggaactgggc
ttcgacggctactacgcgcagctcgcggatttacgcctggctcaccccgacgatgctacc
aagcaggctctgctcgatcagctggccgcctggggccaagacctgcaacgtaccttatga
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